9zd0
C3 local refinement of Urea Transporter B (SLC14A1) bound to human stomatin oligomer
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9zd0 |
| deposition_date | 2025-11-24 |
| title | C3 local refinement of Urea Transporter B (SLC14A1) bound to human stomatin oligomer |
| keywords | Membrane protein, solute carrier, SLC, SPFH, TRANSPORT PROTEIN; TRANSPORT PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 30.70 Å |
| rg_electron | 29.91 Å |
| i0 | 177113000.00 |
| molecular_weight | 118850.0 kDa |
| excluded_volume | 154130 ų |
| envelope_volume | 181280 ų |
| shell_volume | 48266 ų |
| envelope_diameter | 98.6 Å |
| shell_rg | 38.93 Å |
| envelope_rg | 29.86 Å |
| shape_rg | 29.93 Å |
| total_rg | 30.70 Å |
| total_atoms | 8355 |
| n_residues | 1065 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 92.8 Å |
| rg_real | 30.47 Å |
| rg_real_error | 0.51 Å |
| i0_real | 1.7710e+08 |
| i0_real_error | 2.4170e+06 |
| rg_reciprocal | 30.57 Å |
| i0_reciprocal | 177100000.0000 |
| total_estimate | 0.9062 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 41.1 Å |
| skewness | 0.047 |
| kurtosis | -0.552 |
| angular_range | — – 0.2600 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 24220000.0000 |
| n_real_points | 53 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.939; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.978; Smooth: 0.982 |