9zk3
Crystal structure of a C2 domain containing protein from Trichomonas vaginalis
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9zk3 |
| deposition_date | 2025-12-05 |
| last_revision | 2025-12-17 |
| title | Crystal structure of a C2 domain containing protein from Trichomonas vaginalis |
| keywords | SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, C2 domain, LIPID BINDING PROTEIN; LIPID BINDING PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 21.36 Å |
| rg_electron | 20.34 Å |
| i0 | 15205000.00 |
| molecular_weight | 31036.0 kDa |
| excluded_volume | 39612 ų |
| envelope_volume | 46982 ų |
| shell_volume | 19498 ų |
| envelope_diameter | 69.7 Å |
| shell_rg | 26.34 Å |
| envelope_rg | 20.66 Å |
| shape_rg | 20.31 Å |
| total_rg | 21.31 Å |
| total_atoms | 2192 |
| n_residues | 271 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 68.0 Å |
| rg_real | 21.29 Å |
| rg_real_error | 0.41 Å |
| i0_real | 1.5210e+07 |
| i0_real_error | 1.9230e+05 |
| rg_reciprocal | 21.31 Å |
| i0_reciprocal | 15210000.0000 |
| total_estimate | 0.9000 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 1 |
| r_peak_primary | 67.0 Å |
| skewness | 0.207 |
| kurtosis | -0.517 |
| angular_range | — – 0.3700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 3891000.0000 |
| n_real_points | 69 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.925; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.924 |