Crystal structure of Fab 7118 in complex with minor repeat region from circumsporozoite protein

entry_id	9zmb
deposition_date	2025-12-09
title	Crystal structure of Fab 7118 in complex with minor repeat region from circumsporozoite protein
keywords	Antibody for Malaria, IMMUNE SYSTEM; IMMUNE SYSTEM
method	X-RAY DIFFRACTION

rg_guinier	25.90 Å
rg_electron	24.92 Å
i0	41456500.00
molecular_weight	49256.0 kDa
excluded_volume	61382 ų
envelope_volume	76311 ų
shell_volume	25878 ų
envelope_diameter	86.9 Å
shell_rg	31.97 Å
envelope_rg	24.72 Å
shape_rg	24.90 Å
total_rg	25.76 Å
total_atoms	3469
n_residues	441
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	81.6 Å
rg_real	25.90 Å
rg_real_error	0.54 Å
i0_real	4.1460e+07
i0_real_error	5.9280e+05
rg_reciprocal	25.90 Å
i0_reciprocal	41460000.0000
total_estimate	0.9075
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	28.1 Å
skewness	0.293
kurtosis	-0.508
angular_range	— – 0.3050 Å−1
current_alpha	0.0000
highest_alpha	7835000.0000
n_real_points	62
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.954; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.987; Smooth: 0.946

Unit Cell

length_a	73.840 Å
length_b	83.037 Å
length_c	88.460 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	2.090 Å
resolution_low	37.940 Å
r_factor	0.2089
r_work	0.2066
r_free	0.2426

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/zm/9zmb/pr_distribution.json
• pr_output /app/data/pr_computation/zm/9zmb/9zmb.pr.out
• pr_plot /app/data/visualization/pr_computation/zm/9zmb/9zmb_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/zm/9zmb/9zmb.dat
• saxs_fit /app/data/saxs_computation/zm/9zmb/9zmb.fit
• saxs_log /app/data/saxs_computation/zm/9zmb/9zmb.log
• saxs_plot /app/data/visualization/saxs_computation/zm/9zmb/9zmb_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/zm/9zmb/9zmb.fit
pddf	/app/data/pr_computation/zm/9zmb/9zmb.pr.out
profile	/app/data/saxs_computation/zm/9zmb/9zmb.dat