Current Protein Identity:G0S5L1 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
5JPQ Cryo-EM structure of the 90S pre-ribosome Deposited 2016-05-04 Assembly 1 Protein–RNA Heteromer;Protein × 54 PDB declaration: 56-meric(56) Consistent with all polymers
Chain G 1–1802(1802 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.30 Å
5OQL Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum Deposited 2017-08-12 Assembly 1 Protein–RNA Heteromer;Protein × 53 PDB declaration: 55-meric(55) Consistent with all polymers
Chain G 1–1802(1802 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
5WY3 Crystal structure of Chaetomium thermophilum Utp10 middle domain Deposited 2017-01-10 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 472–872(401 aa) Fragment:UNP residues 472-872
Chain B 472–872(401 aa) Fragment:UNP residues 472-872
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;0.1 M Hepes-Na, 2.0 M ammonium sulfate
Resolution 3.20 Å R-free 0.266
5WY4 Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain Deposited 2017-01-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–471(471 aa) Fragment:N-terminal domain, UNP residues 1-471
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5.6;293 K;0.1 M sodium citrate, 1.0 M ammonium dihydrogen phosphate
Resolution 2.50 Å R-free 0.264
5WYL Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices Deposited 2017-01-13 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–471(471 aa) Fragment:N-terminal domain, UNP residues 1-471
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;0.1 M Hepes-Na, 20% w/v PEG 8000
Resolution 2.64 Å R-free 0.267
5WYL Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices Deposited 2017-01-13 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain C 1–471(471 aa) Fragment:N-terminal domain, UNP residues 1-471
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;0.1 M Hepes-Na, 20% w/v PEG 8000
Resolution 2.64 Å R-free 0.267
6RXT Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Deposited 2019-06-10 Assembly 1 Protein–RNA Heteromer;Protein × 55 PDB declaration: 57-meric(57) Consistent with all polymers
Chain UJ 1–1802(1802 aa)
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.00 Å
6RXU Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1 Deposited 2019-06-10 Assembly 1 Protein–RNA Heteromer;Protein × 64 PDB declaration: 66-meric(66) Consistent with all polymers
Chain UJ 1–1802(1802 aa)
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
6RXV Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Deposited 2019-06-10 Assembly 1 Protein–RNA Heteromer;Protein × 66 PDB declaration: 68-meric(68) Consistent with all polymers
Chain UJ 1–1802(1802 aa)
Not recorded ZN ZINC ION × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
6RXX Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Deposited 2019-06-10 Assembly 1 Protein–RNA Heteromer;Protein × 66 PDB declaration: 68-meric(68) Consistent with all polymers
Chain UJ 1–1802(1802 aa)
Not recorded ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 7.10 Å
6RXY Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Deposited 2019-06-10 Assembly 1 Protein–RNA Heteromer;Protein × 57 PDB declaration: 59-meric(59) Consistent with all polymers
Chain UJ 1–1802(1802 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
6RXZ Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Deposited 2019-06-10 Assembly 1 Protein–RNA Heteromer;Protein × 66 PDB declaration: 68-meric(68) Consistent with all polymers
Chain UJ 1–1802(1802 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å