Current Protein Identity:O75822 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2KRB Solution structure of EIF3B-RRM bound to EIF3J peptide Deposited 2009-12-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 45–55(11 aa) Fragment:UNP residues 45-55
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7.5;298 K;Ionic strength (raw mmCIF value) 0.1;Pressure AMBIENT
NMR sample composition 0.7 mM [U-100% 13C; U-100% 15N] eIF3b-RRM, 0.85 mM eIF3j peptide, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 0.7 mM eIF3b-RRM, 0.85 mM [U-100% 13C; U-100% 15N] eIF3j peptide, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 0.7 mM [U-100% 13C; U-100% 15N] eIF3b-RRM, 0.85 mM eIF3j peptide, 100% D2O | 100% D2O
Resolution not provided
3BPJ Crystal structure of human translation initiation factor 3, subunit 1 alpha Deposited 2007-12-18 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 141–220(80 aa) Fragment:Proteolytic fragment: Residues 141-220
Chain C 141–220(80 aa) Fragment:Proteolytic fragment: Residues 141-220
Not recorded UNX UNKNOWN LIGAND × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 4.5;291 K;25% PEG 3350, 0.1M Sodium acetate. Chymotrypsin was added to the crystallization sample at a molar ratio of approx. 1:100, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Resolution 1.85 Å R-free 0.263
3BPJ Crystal structure of human translation initiation factor 3, subunit 1 alpha Deposited 2007-12-18 Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 141–220(80 aa) Fragment:Proteolytic fragment: Residues 141-220
Chain D 141–220(80 aa) Fragment:Proteolytic fragment: Residues 141-220
Not recorded UNX UNKNOWN LIGAND × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 4.5;291 K;25% PEG 3350, 0.1M Sodium acetate. Chymotrypsin was added to the crystallization sample at a molar ratio of approx. 1:100, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Resolution 1.85 Å R-free 0.263
6YBW Structure of a human 48S translational initiation complex - 40S body Deposited 2020-03-18 Assembly 1 Protein–RNA Heteromer;Protein × 24 PDB declaration: 26-meric(26) Consistent with all polymers
Chain z 1–258(258 aa)
Not recorded MG MAGNESIUM ION × 60 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
6ZMW Structure of a human 48S translational initiation complex Deposited 2020-07-04 Assembly 1 Protein–RNA Heteromer;Protein × 54 PDB declaration: 57-meric(57) Consistent with all polymers
Chain z 1–258(258 aa)
Not recorded ZN ZINC ION × 2 MG MAGNESIUM ION × 89 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.70 Å
6ZVJ Structure of a human ABCE1-bound 43S pre-initiation complex - State II Deposited 2020-07-24 Assembly 1 Protein–RNA Heteromer;Protein × 50 PDB declaration: 51-meric(51) Consistent with all polymers
Chain G 1–258(258 aa)
Chain J 1–258(258 aa)
Not recorded ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 2 ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å