Current Protein Identity:P01801
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1SM3 CRYSTAL STRUCTURE OF THE TUMOR SPECIFIC ANTIBODY SM3 COMPLEX WITH ITS PEPTIDE EPITOPE Deposited 1997-12-23 | Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count |
Chain H
2–220(219 aa)
Fragment:FAB FRAGMENT
|
Not recorded | CD CADMIUM ION × 8 CL CHLORIDE ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 6;pH 6.0
|
Resolution 1.95 Å R-free 0.283 |
| 2DLF HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI-DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 6.75 Deposited 1998-12-17 | Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
1–115(115 aa)
Fragment:FV FRAGMENT (VH DOMAIN) SYNONYM: ANTI-DANSYL FV FRAGMENT
|
Not recorded | SO4 SULFATE ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.75;CRYSTALLIZATION CONDITIONS: TEMPERATURE AT 20C. PRECIPITANT SOLUTION CONTAINED
1 AMMONIUM SULFATE AND 0.025 M SODIUM CACODYLATE (PH 6.75). 5 MG/ML OF FV
FRAGMENT., VAPOR DIFFUSION, HANGING DROP
|
Resolution 1.55 Å R-free 0.233 |
| 5A2I Crystal structure of scFv-SM3 in complex with APD-SGalNAc-RP Deposited 2015-05-20 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
6–115(110 aa)
Fragment:RESIDUES 6-115,20-129
|
Not recorded | EDO 1,2-ETHANEDIOL × 2 A2G 2-acetamido-2-deoxy-alpha-D-galactopyranose × 1 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 1.88 Å R-free 0.261 |
| 5A2J Crystal structure of scFv-SM3 in complex with the naked peptide APDTRP Deposited 2015-05-20 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
6–115(110 aa)
Fragment:RESIDUES 6-115,20-129
|
Not recorded | EDO 1,2-ETHANEDIOL × 4 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 1.65 Å R-free 0.197 |
| 5A2K Crystal structure of scFv-SM3 in complex with APD-TGalNAc-RP Deposited 2015-05-20 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
6–115(110 aa)
Fragment:RESIDUES 6-115,20-129
|
Not recorded | EDO 1,2-ETHANEDIOL × 6 A2G 2-acetamido-2-deoxy-alpha-D-galactopyranose × 1 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 1.70 Å R-free 0.216 |
| 5A2L Crystal structure of scFv-SM3 in complex with APD-CGalNAc-RP Deposited 2015-05-20 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
6–115(110 aa)
Fragment:RESIDUES 6-115,20-129
|
Not recorded | EDO 1,2-ETHANEDIOL × 4 A2G 2-acetamido-2-deoxy-alpha-D-galactopyranose × 1 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 1.79 Å R-free 0.204 |
| 5N7B Understanding the singular conformational landscape of the Tn antigens: Sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody Deposited 2017-02-20 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
1–114(114 aa)
|
Not recorded | EDO 1,2-ETHANEDIOL × 7 A2G 2-acetamido-2-deoxy-alpha-D-galactopyranose × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;291 K;20% PEG 3350, 0.2 M disodium hydrogen phosphate
|
Resolution 1.70 Å R-free 0.211 |
| 5OWP Crystal structure of glycopeptide "GVTSAfPDT*RPAP" in complex with scFv-SM3 Deposited 2017-09-02 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain H
6–111(106 aa)
|
Not recorded | EDO 1,2-ETHANEDIOL × 3 A2G 2-acetamido-2-deoxy-alpha-D-galactopyranose × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;291 K;PEG 3350, disodium hydrogen phosphate
|
Resolution 1.85 Å R-free 0.256 |