Current Protein Identity:P02753 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1BRP CRYSTAL STRUCTURE OF THE TRIGONAL FORM OF HUMAN PLASMA RETINOL-BINDING PROTEIN AT 2.5 ANGSTROMS RESOLUTION Deposited 1992-07-27 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 17–198(182 aa)
Not recorded RTL RETINOL × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.50 Å
1BRQ CRYSTAL STRUCTURE OF THE TRIGONAL FORM OF HUMAN PLASMA RETINOL-BINDING PROTEIN AT 2.5 ANGSTROMS RESOLUTION Deposited 1992-07-27 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 17–198(182 aa)
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.50 Å
1JYD Crystal Structure of Recombinant Human Serum Retinol-Binding Protein at 1.7 A Resolution Deposited 2001-09-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 17–198(182 aa)
Not recorded GOL GLYCEROL × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 6.8;289 K;Sodium cacodylate, sodium chloride, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Resolution 1.70 Å R-free 0.270
1JYJ Crystal Structure of a Double Variant (W67L/W91H) of Recombinant Human Serum Retinol-binding Protein at 2.0 A Resolution Deposited 2001-09-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 17–198(182 aa)
Mutation:W67L, W91H GOL GLYCEROL × 5 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 9.1;289 K;Sodium Chloride, Tris/HCl buffer, beta-octyl-glucoside, pH 9.1, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Resolution 2.00 Å R-free 0.229
1QAB The structure of human retinol binding protein with its carrier protein transthyretin reveals interaction with the carboxy terminus of RBP Deposited 1999-02-03 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain E 24–201(178 aa)
Chain F 24–201(178 aa)
Not recorded RTL RETINOL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.4;293 K;pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 3.20 Å R-free 0.403
1RBP CRYSTALLOGRAPHIC REFINEMENT OF HUMAN SERUM RETINOL BINDING PROTEIN AT 2 ANGSTROMS RESOLUTION Deposited 1990-04-02 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 17–198(182 aa)
Not recorded RTL RETINOL × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1RLB RETINOL BINDING PROTEIN COMPLEXED WITH TRANSTHYRETIN Deposited 1995-02-20 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain E 17–190(174 aa)
Chain F 17–190(174 aa)
Not recorded REA RETINOIC ACID × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.10 Å
2WQ9 Crystal Structure of RBP4 bound to Oleic Acid Deposited 2009-08-14 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–192(174 aa) Fragment:RESIDUES 19-192
Not recorded CL CHLORIDE ION × 5 OLA OLEIC ACID × 1 GOL GLYCEROL × 3 X-RAY DIFFRACTION
X-ray crystallization conditions 3.5 TO 4.2 M NACL, 1M HEPES PH 7.2
Resolution 1.65 Å R-free 0.219
2WQA Complex of TTR and RBP4 and Oleic Acid Deposited 2009-08-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain E 19–194(176 aa)
Chain F 19–194(176 aa)
Not recorded SO4 SULFATE ION × 11 OLA OLEIC ACID × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.85 Å R-free 0.253
2WR6 Structure of the complex of RBP4 with linoleic acid Deposited 2009-08-29 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–192(174 aa) Fragment:RESIDUES 19-192
Not recorded CL CHLORIDE ION × 1 ODT (11E,13E,15Z)-OCTADECA-11,13,15-TRIENOIC ACID × 1 X-RAY DIFFRACTION
X-ray crystallization conditions 3.5-4.2M NACL, 0.1M HEPES, PH 7.2
Resolution 1.80 Å R-free 0.227
3BSZ Crystal structure of the transthyretin-retinol binding protein-Fab complex Deposited 2007-12-27 Assembly 1 Protein heterocomplex Heteromer;Protein × 10 PDB declaration: decameric(10) Consistent with protein count
Chain E 19–194(176 aa)
Chain F 19–194(176 aa)
Not recorded RTL RETINOL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 5;295 K;2.35M ammonium phosphate, 10mM sodium citrate, 10mM beta-mercaptoethanol, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Resolution 3.38 Å R-free 0.312
3FMZ Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand Deposited 2008-12-22 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–201(183 aa)
Not recorded 2T1 2-[({4-[2-(trifluoromethyl)phenyl]piperidin-1-yl}carbonyl)amino]benzoic acid × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 6.5;289 K;0.4M Mg formate, 0.1M GndHCl, 0.1M Bis-Tris 6.5, vapor diffusion, temperature 289K
Resolution 2.90 Å R-free 0.286
3FMZ Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand Deposited 2008-12-22 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 19–201(183 aa)
Not recorded 2T1 2-[({4-[2-(trifluoromethyl)phenyl]piperidin-1-yl}carbonyl)amino]benzoic acid × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 6.5;289 K;0.4M Mg formate, 0.1M GndHCl, 0.1M Bis-Tris 6.5, vapor diffusion, temperature 289K
Resolution 2.90 Å R-free 0.286
4O9S Crystal structure of Retinol-Binding Protein 4 (RBP4)in complex with a non-retinoid ligand Deposited 2014-01-02 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–201(183 aa)
Not recorded 2RY 1-[4-(7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(12),2(6),8,10-tetraen-12-yl)piperazin-1-yl]-2-[2-(trifluoromethyl)phenyl]ethanone × 1 EDO 1,2-ETHANEDIOL × 13 CL CHLORIDE ION × 2 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8;289 K;1M ammonium phosphate dibasic, 0.1M imidazole, 0.2M sodium chloride, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Resolution 2.30 Å R-free 0.261
4O9S Crystal structure of Retinol-Binding Protein 4 (RBP4)in complex with a non-retinoid ligand Deposited 2014-01-02 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 19–201(183 aa)
Not recorded 2RY 1-[4-(7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(12),2(6),8,10-tetraen-12-yl)piperazin-1-yl]-2-[2-(trifluoromethyl)phenyl]ethanone × 1 EDO 1,2-ETHANEDIOL × 13 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8;289 K;1M ammonium phosphate dibasic, 0.1M imidazole, 0.2M sodium chloride, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Resolution 2.30 Å R-free 0.261
4O9S Crystal structure of Retinol-Binding Protein 4 (RBP4)in complex with a non-retinoid ligand Deposited 2014-01-02 Assembly 3 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 19–201(183 aa)
Chain B 19–201(183 aa)
Not recorded 2RY 1-[4-(7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(12),2(6),8,10-tetraen-12-yl)piperazin-1-yl]-2-[2-(trifluoromethyl)phenyl]ethanone × 2 EDO 1,2-ETHANEDIOL × 26 CL CHLORIDE ION × 3 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8;289 K;1M ammonium phosphate dibasic, 0.1M imidazole, 0.2M sodium chloride, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Resolution 2.30 Å R-free 0.261
4PSQ Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with a non-retinoid ligand Deposited 2014-03-07 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 19–201(183 aa) Fragment:UNP residues 19-201
Not recorded 2WL (1-benzyl-1H-imidazol-4-yl)[4-(2-chlorophenyl)piperazin-1-yl]methanone × 1 PO4 PHOSPHATE ION × 1 EDO 1,2-ETHANEDIOL × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;1 M ammonium phosphate dibasic, 0.1 M imidazole, pH 8.0, 200 mM sodium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 2.40 Å R-free 0.287
4PSQ Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with a non-retinoid ligand Deposited 2014-03-07 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–201(183 aa) Fragment:UNP residues 19-201
Not recorded 2WL (1-benzyl-1H-imidazol-4-yl)[4-(2-chlorophenyl)piperazin-1-yl]methanone × 1 PO4 PHOSPHATE ION × 1 EDO 1,2-ETHANEDIOL × 12 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;1 M ammonium phosphate dibasic, 0.1 M imidazole, pH 8.0, 200 mM sodium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 2.40 Å R-free 0.287
5NTY Structure of non-fluorescent human plasma RBP4 Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded PLM PALMITIC ACID × 1 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS;279 K;4.5M NaCl, 20mM Na cacodylate, pH 6.8
Resolution 2.00 Å R-free 0.230
5NU2 Structure of non-fluorescent human urine RBP4 Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded PLM PALMITIC ACID × 1 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;4.3 M NaCl, 100 mM Hepes, pH 7.5
Resolution 1.50 Å R-free 0.184
5NU6 Structure of non-fluorescent human amniotic fluid RBP4 Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded PLM PALMITIC ACID × 1 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;4.3 M NaCl, 100 mM Hepes, pH 7.5
Resolution 1.68 Å R-free 0.197
5NU7 Structure of human holo plasma RBP4 Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded RTL RETINOL × 1 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS;277 K;4.5 M NaCl, 20 mM Na cacodylate, pH 6.8
Resolution 1.50 Å R-free 0.210
5NU8 Structure of human urine RBP4 saturated with palmitate Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded PLM PALMITIC ACID × 1 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;4.3 M NaCl, 100 mM Hepes, pH 7.5
Resolution 1.59 Å R-free 0.212
5NU9 Structure of human amniotic fluid RBP4 saturated with palmitate Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded PLM PALMITIC ACID × 1 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;4.3 M NaCl, 100 mM Hepes, pH 7.5
Resolution 1.50 Å R-free 0.195
5NUA Structure of human urine RBP4 saturated with laurate Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded DAO LAURIC ACID × 1 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;4.3 M NaCl, 100 mM Hepes, pH 7.5
Resolution 1.60 Å R-free 0.197
5NUB Structure of human amniotic fluid RBP4 saturated with laurate Deposited 2017-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 19–200(182 aa)
Not recorded DAO LAURIC ACID × 1 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;4.3 M NaCl, 100 mM Hepes, pH 7.5
Resolution 1.60 Å R-free 0.205
6QBA Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand A1120 and engineered binding scaffold Deposited 2018-12-20 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 19–201(183 aa)
Not recorded 2T1 2-[({4-[2-(trifluoromethyl)phenyl]piperidin-1-yl}carbonyl)amino]benzoic acid × 1 IMD IMIDAZOLE × 5 PEG DI(HYDROXYETHYL)ETHER × 1 ZN ZINC ION × 3 ACT ACETATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;295.15 K;0.2 M Zn acetate 0.1 M imidazole pH 8 20% PEG 3K
Resolution 1.80 Å R-free 0.221