当前蛋白身份:P04150
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相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 1M2Z Crystal structure of a dimer complex of the human glucocorticoid receptor ligand-binding domain bound to dexamethasone and a TIF2 coactivator motif 提交 2002-06-26 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
521–777(257 aa)
片段:Ligand Binding Domain, residues 521-777
链 D
521–777(257 aa)
片段:Ligand Binding Domain, residues 521-777
|
突变:F602S 突变:F602S | BOG octyl beta-D-glucopyranoside × 3 DEX DEXAMETHASONE × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8;293 K;salts, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
分辨率 2.50 Å R-free 0.267 |
| 1NHZ Crystal Structure of the Antagonist Form of Glucocorticoid Receptor 提交 2002-12-20 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:residue 500-777, hinge and steroid binding domains
|
突变:N517D, F602S, C638D | 486 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE × 1 HEZ HEXANE-1,6-DIOL × 3 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.2;288 K;PEG 8000, 1, 6-hexanediol, NaSCN, Tris-HCl, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 288K
|
分辨率 2.30 Å R-free 0.276 |
| 1NHZ Crystal Structure of the Antagonist Form of Glucocorticoid Receptor 提交 2002-12-20 | Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:residue 500-777, hinge and steroid binding domains
|
突变:N517D, F602S, C638D | 486 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE × 2 HEZ HEXANE-1,6-DIOL × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.2;288 K;PEG 8000, 1, 6-hexanediol, NaSCN, Tris-HCl, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 288K
|
分辨率 2.30 Å R-free 0.276 |
| 1P93 CRYSTAL STRUCTURE OF THE AGONIST FORM OF GLUCOCORTICOID RECEPTOR 提交 2003-05-09 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:RESIDUE 500-777, hinge and steroid binding domains
|
突变:N517D, F602S, C638D | DEX DEXAMETHASONE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;281 K;PEG 400, MgCl2, Dioxane, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP
|
分辨率 2.70 Å R-free 0.363 |
| 1P93 CRYSTAL STRUCTURE OF THE AGONIST FORM OF GLUCOCORTICOID RECEPTOR 提交 2003-05-09 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
500–777(278 aa)
片段:RESIDUE 500-777, hinge and steroid binding domains
|
突变:N517D, F602S, C638D | DEX DEXAMETHASONE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;281 K;PEG 400, MgCl2, Dioxane, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP
|
分辨率 2.70 Å R-free 0.363 |
| 1P93 CRYSTAL STRUCTURE OF THE AGONIST FORM OF GLUCOCORTICOID RECEPTOR 提交 2003-05-09 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 C
500–777(278 aa)
片段:RESIDUE 500-777, hinge and steroid binding domains
|
突变:N517D, F602S, C638D | DEX DEXAMETHASONE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;281 K;PEG 400, MgCl2, Dioxane, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP
|
分辨率 2.70 Å R-free 0.363 |
| 1P93 CRYSTAL STRUCTURE OF THE AGONIST FORM OF GLUCOCORTICOID RECEPTOR 提交 2003-05-09 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 D
500–777(278 aa)
片段:RESIDUE 500-777, hinge and steroid binding domains
|
突变:N517D, F602S, C638D | DEX DEXAMETHASONE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;281 K;PEG 400, MgCl2, Dioxane, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP
|
分辨率 2.70 Å R-free 0.363 |
| 3BQD Doubling the Size of the Glucocorticoid Receptor Ligand Binding Pocket by Deacylcortivazol 提交 2007-12-20 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
525–777(253 aa)
片段:glucocorticoid receptor ligand binding domain (residues 525-777)
|
突变:F602S | DAY 1-[(1R,2R,3aS,3bS,10aR,10bS,11S,12aS)-1,11-dihydroxy-2,5,10a,12a-tetramethyl-7-phenyl-1,2,3,3a,3b,7,10,10a,10b,11,12,12a-dodecahydrocyclopenta[5,6]naphtho[1,2-f]indazol-1-yl]-2-hydroxyethanone × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;298 K;1.3 M ammonium sulfate, 100 mM Tris, 8% glycerol, 3 mM n-hexadecyl-beta-maltoside, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
|
分辨率 2.50 Å R-free 0.261 |
| 3CLD Ligand binding domain of the glucocorticoid receptor complexed with fluticazone furoate 提交 2008-03-18 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
521–777(257 aa)
片段:ligand binding domain, UNP residues 521-777
链 B
521–777(257 aa)
片段:ligand binding domain, UNP residues 521-777
|
突变:F602Y, C638G 突变:F602Y, C638G | GW6 (6alpha,11alpha,14beta,16alpha,17alpha)-6,9-difluoro-17-{[(fluoromethyl)sulfanyl]carbonyl}-11-hydroxy-16-methyl-3-oxoan drosta-1,4-dien-17-yl furan-2-carboxylate × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;295 K;100mM BisTrisPropane, 2.2M NaCl, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.84 Å R-free 0.267 |
| 3E7C Glucocorticoid Receptor LBD bound to GSK866 提交 2008-08-18 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
521–777(257 aa)
片段:UNP RESIDUES 521-777
链 B
521–777(257 aa)
片段:UNP RESIDUES 521-777
|
突变:F602Y, C638G 突变:F602Y, C638G | 866 5-amino-N-[(2S)-2-({[(2,6-dichlorophenyl)carbonyl](ethyl)amino}methyl)-3,3,3-trifluoro-2-hydroxypropyl]-1-(4-fluorophenyl)-1H-pyrazole-4-carboxamide × 2 GOL GLYCEROL × 3 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1M MES pH 6.5, 1.6M MgSO4,
0.1% betahexaglucoside, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.15 Å R-free 0.266 |
| 3E7C Glucocorticoid Receptor LBD bound to GSK866 提交 2008-08-18 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
521–777(257 aa)
片段:UNP RESIDUES 521-777
|
突变:F602Y, C638G | 866 5-amino-N-[(2S)-2-({[(2,6-dichlorophenyl)carbonyl](ethyl)amino}methyl)-3,3,3-trifluoro-2-hydroxypropyl]-1-(4-fluorophenyl)-1H-pyrazole-4-carboxamide × 1 GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1M MES pH 6.5, 1.6M MgSO4,
0.1% betahexaglucoside, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.15 Å R-free 0.266 |
| 3E7C Glucocorticoid Receptor LBD bound to GSK866 提交 2008-08-18 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
521–777(257 aa)
片段:UNP RESIDUES 521-777
|
突变:F602Y, C638G | 866 5-amino-N-[(2S)-2-({[(2,6-dichlorophenyl)carbonyl](ethyl)amino}methyl)-3,3,3-trifluoro-2-hydroxypropyl]-1-(4-fluorophenyl)-1H-pyrazole-4-carboxamide × 1 GOL GLYCEROL × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1M MES pH 6.5, 1.6M MgSO4,
0.1% betahexaglucoside, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.15 Å R-free 0.266 |
| 3H52 Crystal structure of the antagonist form of human glucocorticoid receptor 提交 2009-04-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 A
528–777(250 aa)
片段:Steroid-binding domain, UNP residues 528-777
链 D
528–777(250 aa)
片段:Steroid-binding domain, UNP residues 528-777
|
突变:F602S,C638D,W712S, E684A, E688A 突变:F602S,C638D,W712S, E684A, E688A | 486 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;VAPOR DIFFUSION, SITTING DROP
|
分辨率 2.80 Å R-free 0.283 |
| 3H52 Crystal structure of the antagonist form of human glucocorticoid receptor 提交 2009-04-21 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 B
528–777(250 aa)
片段:Steroid-binding domain, UNP residues 528-777
链 C
528–777(250 aa)
片段:Steroid-binding domain, UNP residues 528-777
|
突变:F602S,C638D,W712S, E684A, E688A 突变:F602S,C638D,W712S, E684A, E688A | 486 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE × 2 GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;VAPOR DIFFUSION, SITTING DROP
|
分辨率 2.80 Å R-free 0.283 |
| 3K22 Glucocorticoid Receptor with Bound alaninamide 10 with TIF2 peptide 提交 2009-09-29 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
521–777(257 aa)
|
突变:F602Y, C638G | JZS N-[(1R)-2-amino-1-methyl-2-oxoethyl]-3-(6-methyl-4-{[3,3,3-trifluoro-2-hydroxy-2-(trifluoromethyl)propyl]amino}-1H-indazol-1-yl)benzamide × 1 JZR hexyl beta-D-glucopyranoside × 1 | X-RAY DIFFRACTION | mmCIF 未提供已读取条件 | 分辨率 2.10 Å R-free 0.255 |
| 3K22 Glucocorticoid Receptor with Bound alaninamide 10 with TIF2 peptide 提交 2009-09-29 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
521–777(257 aa)
|
突变:F602Y, C638G | JZS N-[(1R)-2-amino-1-methyl-2-oxoethyl]-3-(6-methyl-4-{[3,3,3-trifluoro-2-hydroxy-2-(trifluoromethyl)propyl]amino}-1H-indazol-1-yl)benzamide × 1 JZR hexyl beta-D-glucopyranoside × 2 | X-RAY DIFFRACTION | mmCIF 未提供已读取条件 | 分辨率 2.10 Å R-free 0.255 |
| 3K23 Glucocorticoid Receptor with Bound D-prolinamide 11 提交 2009-09-29 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
521–777(257 aa)
片段:UNP residues 521-777, Ligand Binding Domain
|
突变:F602Y, C638G | JZN 1-{[3-(4-{[(2R)-4-(5-fluoro-2-methoxyphenyl)-2-hydroxy-4-methyl-2-(trifluoromethyl)pentyl]amino}-6-methyl-1H-indazol-1-yl)phenyl]carbonyl}-D-prolinamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1M MES 6.5, 28% PEG 5K MME, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 3.00 Å R-free 0.289 |
| 3K23 Glucocorticoid Receptor with Bound D-prolinamide 11 提交 2009-09-29 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
521–777(257 aa)
片段:UNP residues 521-777, Ligand Binding Domain
|
突变:F602Y, C638G | JZN 1-{[3-(4-{[(2R)-4-(5-fluoro-2-methoxyphenyl)-2-hydroxy-4-methyl-2-(trifluoromethyl)pentyl]amino}-6-methyl-1H-indazol-1-yl)phenyl]carbonyl}-D-prolinamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1M MES 6.5, 28% PEG 5K MME, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 3.00 Å R-free 0.289 |
| 3K23 Glucocorticoid Receptor with Bound D-prolinamide 11 提交 2009-09-29 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 C
521–777(257 aa)
片段:UNP residues 521-777, Ligand Binding Domain
|
突变:F602Y, C638G | JZN 1-{[3-(4-{[(2R)-4-(5-fluoro-2-methoxyphenyl)-2-hydroxy-4-methyl-2-(trifluoromethyl)pentyl]amino}-6-methyl-1H-indazol-1-yl)phenyl]carbonyl}-D-prolinamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1M MES 6.5, 28% PEG 5K MME, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 3.00 Å R-free 0.289 |
| 4CSJ The discovery of potent selective glucocorticoid receptor modulators, suitable for inhalation 提交 2014-03-07 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:LIGAND BINDING DOMAIN, RESIDUES 500-777
|
突变:YES | EDO 1,2-ETHANEDIOL × 1 NN7 N-[(2S)-1-[[1-(4-fluorophenyl)indazol-4-yl]amino]propan-2-yl]-2,4,6-trimethyl-benzenesulfonamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;10% PEG8000, 20% ETHYLENE GLYCOL AND 0.1 M HEPES PH7.5
|
分辨率 2.30 Å R-free 0.234 |
| 4HN5 GR DNA Binding Domain - TSLP nGRE Complex 提交 2012-10-18 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
417–506(90 aa)
片段:Glucocorticoid Receptor DNA Binding Domain
链 B
417–506(90 aa)
片段:Glucocorticoid Receptor DNA Binding Domain
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;15 % PEG 20000, 6 % glycerol, 7.5 % ethanol, 0.1M HEPES pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.90 Å R-free 0.235 |
| 4HN6 GR DNA Binding Domain R460D/D462R - TSLP nGRE Complex 提交 2012-10-18 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
417–506(90 aa)
链 B
417–506(90 aa)
|
突变:R460D,D462R 突变:R460D,D462R | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;15 % PEG 2000 MME, 6 % glycerol, 0.1M HEPES pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.55 Å R-free 0.248 |
| 4LSJ Crystal Structure of the Glucocorticoid Receptor Ligand Binding Domain Bound to a Dibenzoxapine Sulfonamide 提交 2013-07-22 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
522–777(256 aa)
片段:Steroid-binding region, residues 522-777
|
突变:F602Y, C638G | LSJ N-{3-[(1Z)-1-(10-methoxydibenzo[b,e]oxepin-11(6H)-ylidene)propyl]phenyl}methanesulfonamide × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;294.15 K;0.1 M bis-tris propane pH 5.5, 0.3 M Magnesium Formate, VAPOR DIFFUSION, SITTING DROP, temperature 294.15K
|
分辨率 2.35 Å R-free 0.236 |
| 4LSJ Crystal Structure of the Glucocorticoid Receptor Ligand Binding Domain Bound to a Dibenzoxapine Sulfonamide 提交 2013-07-22 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
522–777(256 aa)
片段:Steroid-binding region, residues 522-777
|
突变:F602Y, C638G | LSJ N-{3-[(1Z)-1-(10-methoxydibenzo[b,e]oxepin-11(6H)-ylidene)propyl]phenyl}methanesulfonamide × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;294.15 K;0.1 M bis-tris propane pH 5.5, 0.3 M Magnesium Formate, VAPOR DIFFUSION, SITTING DROP, temperature 294.15K
|
分辨率 2.35 Å R-free 0.236 |
| 4MDD Crystal Structure of the Glucocorticoid Receptor Bound to a Non-steroidal Antagonist Reveals Repositioning and Partial Disordering of Activation Function Helix 12 提交 2013-08-22 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
522–777(256 aa)
片段:unp residues 522-777
链 B
522–777(256 aa)
片段:unp residues 522-777
|
突变:L525S, L528S, L535A, V538T, F602Y, C638D, E684A, E688A, W712S 突变:L525S, L528S, L535A, V538T, F602Y, C638D, E684A, E688A, W712S | 29M N-[2-{[benzyl(methyl)amino]methyl}-3-(4-fluoro-2-methoxyphenyl)-5-(propan-2-yl)-1H-indol-7-yl]methanesulfonamide × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7;294 K;100mM Tris HCl plus 6% 1,6 - Hexanediol + 24% PEG 8K, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 294K
|
分辨率 2.40 Å R-free 0.258 |
| 4P6W Crystal Structure of mometasone furoate-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
526–777(252 aa)
片段:Ligand binding domain (UNP residues 526-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, K699A, K703A | MOF MOMETASONE FUROATE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 1.95 Å R-free 0.225 |
| 4P6X Crystal Structure of cortisol-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
523–777(255 aa)
片段:Ligand binding domain (UNP residues 523-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, E684A, E688A | HCY (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 2.50 Å R-free 0.276 |
| 4P6X Crystal Structure of cortisol-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 C
523–777(255 aa)
片段:Ligand binding domain (UNP residues 523-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, E684A, E688A | HCY (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 2.50 Å R-free 0.276 |
| 4P6X Crystal Structure of cortisol-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 E
523–777(255 aa)
片段:Ligand binding domain (UNP residues 523-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, E684A, E688A | HCY (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 2.50 Å R-free 0.276 |
| 4P6X Crystal Structure of cortisol-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 G
523–777(255 aa)
片段:Ligand binding domain (UNP residues 523-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, E684A, E688A | HCY (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 2.50 Å R-free 0.276 |
| 4P6X Crystal Structure of cortisol-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 I
523–777(255 aa)
片段:Ligand binding domain (UNP residues 523-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, E684A, E688A | HCY (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 2.50 Å R-free 0.276 |
| 4P6X Crystal Structure of cortisol-bound glucocorticoid receptor ligand binding domain 提交 2014-03-25 | Assembly 6 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 K
523–777(255 aa)
片段:Ligand binding domain (UNP residues 523-777)
|
突变:F602A, C622Y, T668V, S674T, V675I, E684A, E688A | HCY (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1 M imidazole, pH6.5, and 1 M sodium acetate trihydrate. 30% sucrose
|
分辨率 2.50 Å R-free 0.276 |
| 4UDC GR in complex with dexamethasone 提交 2014-12-09 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:LIGAND BINDING DOMAIN, UNP RESIDUES 500-777
|
突变:YES | CPS 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE × 1 DEX DEXAMETHASONE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;10% PEG8000, 10% ETHYLENE GLYCOL, 0.1 M HEPES PH 7.5
|
分辨率 2.50 Å R-free 0.253 |
| 4UDD GR in complex with desisobutyrylciclesonide 提交 2014-12-09 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:LIGAND BINDING DOMAIN, UNP RESIDUES 500-777
|
突变:YES | CPS 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE × 3 EDO 1,2-ETHANEDIOL × 1 CV7 DESISOBUYTYRYL CICLESONIDE × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;10% PEG8000, 20% ETHYLENE GLYCOL, 0.1 M HEPES PH 7.5
|
分辨率 1.80 Å R-free 0.224 |
| 5CC1 S425G Glucocorticoid receptor DNA binding domain - (+)GRE complex 提交 2015-07-01 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–480(90 aa)
链 B
391–480(90 aa)
|
突变:S425G 突变:S425G | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.1 M HEPES, 20% PEG 8000, and 4% ethylene glycol
|
分辨率 2.30 Å R-free 0.279 |
| 5CC1 S425G Glucocorticoid receptor DNA binding domain - (+)GRE complex 提交 2015-07-01 | Assembly 2 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 W
391–480(90 aa)
链 X
391–480(90 aa)
|
突变:S425G 突变:S425G | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.1 M HEPES, 20% PEG 8000, and 4% ethylene glycol
|
分辨率 2.30 Å R-free 0.279 |
| 5E69 Glucocorticoid receptor DNA binding domain - IL8 NF-kB response element complex 提交 2015-10-09 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–480(90 aa)
片段:unp residues 391-480
链 B
391–480(90 aa)
片段:unp residues 391-480
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;298 K;0.1 M HEPES pH 7.5, 7.5% glycerol, 22% PEG 20000
|
分辨率 1.85 Å R-free 0.242 |
| 5E6A Glucocorticoid receptor DNA binding domain - PLAU NF-kB response element complex 提交 2015-10-09 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–480(90 aa)
片段:unp residues 391-480
链 B
391–480(90 aa)
片段:unp residues 391-480
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;298 K;0.05 M sodium cacodylate, 0.05 M spermine, and 16% PEG 400
|
分辨率 2.20 Å R-free 0.266 |
| 5E6B Glucocorticoid receptor DNA binding domain - RELB NF-kB response element complex 提交 2015-10-09 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–480(90 aa)
片段:unp residues 391-480
链 B
391–480(90 aa)
片段:unp residues 391-480
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;298 K;0.1 M HEPES pH 7.5, 7 uM spermine, 15% PEG 8000
|
分辨率 2.25 Å R-free 0.227 |
| 5E6C Glucocorticoid receptor DNA binding domain - CCL2 NF-kB response element complex 提交 2015-10-09 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–480(90 aa)
片段:unp residues 391-480
链 B
391–480(90 aa)
片段:unp residues 391-480
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;298 K;0.1 M sodium malonate, 6% glycerol, 5% PEG 3350
|
分辨率 2.20 Å R-free 0.271 |
| 5E6D Glucocorticoid receptor DNA binding domain - ICAM1 NF-kB response element complex 提交 2015-10-09 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–480(90 aa)
链 B
391–480(90 aa)
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;298 K;0.1 M HEPES pH 7.7, 3% ethylene glycol, 10% PEG 8000
|
分辨率 2.40 Å R-free 0.283 |
| 5EMC Transcription factor GRDBD and smGRE complex 提交 2015-11-06 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
411–500(90 aa)
片段:UNP RESIDUES 411-500
链 B
411–500(90 aa)
片段:UNP RESIDUES 411-500
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;289 K;50mM HEPES, 100mM KCl, 10mM MgCl2, 5% PEG 400
|
分辨率 2.30 Å R-free 0.261 |
| 5EMP Transcription factor GRDBD and mmGRE complex 提交 2015-11-06 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
411–500(90 aa)
片段:UNP RESIDUES 411-500
链 B
411–500(90 aa)
片段:UNP RESIDUES 411-500
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;289 K;50mM Tris, 200mM KCl, 50mM MgCl2, 10% PEG 4000
|
分辨率 2.30 Å R-free 0.238 |
| 5EMQ Transcription factor GRDBD and GRE complex 提交 2015-11-06 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
411–500(90 aa)
片段:UNP RESIDUES 411-500
链 B
411–500(90 aa)
片段:UNP RESIDUES 411-500
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;289 K;50mM Na Cacodylate, 2.25mM Spermine, 18mM MgCl2, 9% isopropanol
|
分辨率 2.30 Å R-free 0.224 |
| 5G3J Discovery of New Selective Glucocorticoid Receptor Agonist Leads 提交 2016-04-27 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:LIGAND BINDING DOMAIN, RESIDUES 500-777
|
突变:YES | CPS 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE × 1 EDO 1,2-ETHANEDIOL × 1 E7T 5-[[(1S,2R,4R)-4-ethyl-6,7-bis(fluoranyl)-2,5-bis(oxidanyl)-2-(trifluoromethyl)-3,4-dihydro-1H-naphthalen-1-yl]amino]-1H-quinolin-2-one × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;8% PEG8000, 15% ETHYLENE GLYCOL AND 0.1 M HEPES PH 7.5
|
分辨率 2.40 Å R-free 0.235 |
| 5G5W Structure guided design and discovery of Indazole ethers as highly potent, non-steroidal Glucocorticoid receptor modulators 提交 2016-06-08 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
片段:LIGAND BINDING DOMAIN, UNP RESIDUES 500-777
|
突变:YES | EDO 1,2-ETHANEDIOL × 1 R8C 2,2,2-trifluoro-N-[(1R,2S)-1-{[1-(4-fluorophenyl)-1H-indazol-5-yl]oxy}-1-phenylpropan-2-yl]acetamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 7.5;12% PEG8000, 20% ETHYLENE GLYCOL AND 0.1 M HEPES PH 7.5
|
分辨率 2.20 Å R-free 0.210 |
| 5NFP Glucocorticoid Receptor in complex with budesonide 提交 2017-03-15 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
|
未记录 | CPS 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE × 1 EDO 1,2-ETHANEDIOL × 1 GOL GLYCEROL × 1 8W5 (1~{S},2~{S},4~{R},6~{R},8~{S},9~{S},11~{S},12~{S},13~{R})-9,13-dimethyl-11-oxidanyl-8-(2-oxidanylethanoyl)-6-propyl-5,7-dioxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosa-14,17-dien-16-one × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;277 K;2 ul of protein, 0.2ul of Polypropylene Glycol 400 and 0.8ul of well solution (10-12% PEG8000, 20% ethylene glycol and 0.1 M Hepes pH 7.5).
|
分辨率 2.10 Å R-free 0.202 |
| 5NFT Glucocorticoid Receptor in complex with AZD5423 提交 2017-03-15 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
|
未记录 | EDO 1,2-ETHANEDIOL × 3 8W8 2,2,2-tris(fluoranyl)-~{N}-[(1~{R},2~{S})-1-[1-(4-fluorophenyl)indazol-5-yl]oxy-1-(3-methoxyphenyl)propan-2-yl]ethanamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;277 K;2 ul of protein and 1ul of well solution (8-12% PEG8000, 10-20% ethylene glycol and 0.1 M Hepes pH 7.5)
|
分辨率 2.30 Å R-free 0.215 |
| 5UC3 Structure of the dominant negative mutant Glucocorticoid Receptor alpha (L733K/N734P) complexed with RU-486 提交 2016-12-21 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
522–777(256 aa)
片段:UNP residues 522-777
链 B
522–777(256 aa)
片段:UNP residues 522-777
|
突变:L733K, N734P 突变:L733K, N734P | 486 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE × 4 MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 6 EDO 1,2-ETHANEDIOL × 18 EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M HEPES, 0.1 M sodium citrate, 15 % MPD (v/v)
|
分辨率 2.01 Å R-free 0.212 |
| 5VA0 Glucocorticoid Receptor DNA Binding Domain in complex with AP-1 response element from VCAM-1 Promoter 提交 2017-03-24 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
84–155(72 aa)
片段:unp residues 84-155
链 B
84–155(72 aa)
片段:unp residues 84-155
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;0.05 M Na Cacodylate (pH 7), 5 mM MgCl2, 1 mM Spermine, and 2 % t-Butanol
|
分辨率 2.29 Å R-free 0.231 |
| 5VA7 Glucocorticoid Receptor DNA Binding Domain - IL11 AP-1 recognition element Complex 提交 2017-03-24 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
89–158(70 aa)
片段:unp residues 89-158
链 B
89–158(70 aa)
片段:unp residues 89-158
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;0.2 M Lithium Nitratie, 15 % PEG 3350, 1 % glycerol
|
分辨率 2.15 Å R-free 0.227 |
| 6BQU Human GR (418-507) in complex with monomeric DNA binding site 提交 2017-11-28 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
421–490(70 aa)
链 B
421–490(70 aa)
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;0.005 M Magnesium sulfate heptahydrate, 0.05 M MES monohydrate, pH 6.0, 5 percent w/v, Polyethylene glycol 4,000
|
分辨率 2.50 Å R-free 0.249 |
| 6BSF Human GR (418-507) in complex with monomeric DNA binding site 提交 2017-12-02 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
419–505(87 aa)
链 B
419–505(87 aa)
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;0.05 M MES monohydrate pH 6.0
0.005 M Magnesium sulfate heptahydrate
5% w/v Polyethylene glycol 4,000
|
分辨率 2.40 Å R-free 0.233 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 3 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 C
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 4 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 D
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 5 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 E
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 6 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 F
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 7 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 G
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6CFN Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain 提交 2018-02-15 | Assembly 8 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 H
418–506(89 aa)
|
突变:UNP Residues 418-506 | ZN ZINC ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate
|
分辨率 2.50 Å R-free 0.248 |
| 6DXK Glucocorticoid Receptor in complex with Compound 11 提交 2018-06-29 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
523–778(256 aa)
链 B
523–778(256 aa)
|
未记录 | HJ4 (8S,11R,13S,14S,17S)-11-[4-(dimethylamino)phenyl]-17-(3,3-dimethylbut-1-yn-1-yl)-17-hydroxy-13-methyl-1,2,6,7,8,11,12,13,14,15,16,17-dodecahydro-3H-cyclopenta[a]phenanthren-3-one (non-preferred name) × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;293 K;pH 6.75
|
分辨率 3.05 Å R-free 0.260 |
| 6EL6 Glucocorticoid Receptor in complex with compound 4 提交 2017-09-28 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
|
未记录 | EDO 1,2-ETHANEDIOL × 1 B9Q ~{N}-[(1~{R},2~{S})-1-[1-(4-fluorophenyl)indazol-5-yl]oxy-1-(6-methoxypyridin-3-yl)propan-2-yl]cyclopropanecarboxamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;277 K;8-10% PEG8000, 10-19% Ethylene Glycol, 0.1 M HEPES pH 7.5
|
分辨率 2.40 Å R-free 0.283 |
| 6EL7 Glucocorticoid Receptor in complex with compound 31 提交 2017-09-28 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
|
未记录 | EDO 1,2-ETHANEDIOL × 1 B9T ~{N}-[(1~{R},2~{S})-1-(2-bromanyl-4-cyano-phenoxy)-1-(2-cyclopropylpyrimidin-5-yl)propan-2-yl]-2,2-bis(fluoranyl)propanamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;277 K;8-10% PEG8000, 10-19% Ethylene Glycol, 0.1 M HEPES pH 7.5
|
分辨率 2.18 Å R-free 0.225 |
| 6EL9 Glucocorticoid Receptor in complex with AZD9567 提交 2017-09-28 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
500–777(278 aa)
|
未记录 | EDO 1,2-ETHANEDIOL × 1 B9W 2,2-bis(fluoranyl)-~{N}-[(1~{R},2~{S})-3-methyl-1-[1-(1-methyl-6-oxidanylidene-pyridin-3-yl)indazol-5-yl]oxy-1-phenyl-butan-2-yl]propanamide × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;277 K;8-10% PEG8000, 10-19% Ethylene Glycol, 0.1 M HEPES pH 7.5
|
分辨率 2.19 Å R-free 0.224 |
| 6X6D Glucocorticoid Receptor DNA binding domain in complex with unmodified precursor for a modern recognition element (pre-GBS) 提交 2020-05-28 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–464(74 aa)
链 B
391–464(74 aa)
|
未记录 | ZN ZINC ION × 4 CAC CACODYLATE ION × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;289.15 K;50 mM Sodium cacodylate pH 6.5, 80 mM Calcium chloride, 1 % glycerol, and 8.5% PEG 400
|
分辨率 2.48 Å R-free 0.211 |
| 6X6E Glucocorticoid Receptor DNA binding domain in complex with methylated precursor for a modern recognition element (methylated pre-GBS) 提交 2020-05-28 | Assembly 1 蛋白–DNA 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致 |
链 A
391–465(75 aa)
链 B
391–465(75 aa)
|
未记录 | ZN ZINC ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298.15 K;50 mM sodium cacodylate pH 6.5, 80 mM calcium chloride, 1 % glycerol, and 7 % PEG 400
|
分辨率 2.00 Å R-free 0.212 |
| 6YMO Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pS617 peptide 提交 2020-04-09 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
611–623(13 aa)
链 D
611–623(13 aa)
|
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) | SAL 2-HYDROXYBENZOIC ACID × 1 SO4 SULFATE ION × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
EVAPORATION;pH 6.8;277.15 K;2.04 M ammonium sulfate, 0.2 M sodium citrate supplemented with 10% of an additive buffer containing 0.33% w/v 3-aminobenzoic acid, 0.33% w/v 3-aminosalicylic acid, 0.33% w/v salicylic acid and 0.02 M HEPES sodium pH 6.8
|
分辨率 2.02 Å R-free 0.234 |
| 6YO8 Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pT524 peptide 提交 2020-04-14 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 E
518–530(13 aa)
链 F
518–530(13 aa)
|
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
EVAPORATION;pH 8.3;277.15 K;1.29 M MgCl2, 22.5% PEG 3350, 0.1 M Tris pH 8.3, supplemented with 10% of an additive buffer containing 40% v/v of 2,5-Hexanediol
|
分辨率 2.09 Å R-free 0.238 |
| 6YO8 Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pT524 peptide 提交 2020-04-14 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 G
518–530(13 aa)
链 H
518–530(13 aa)
|
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
EVAPORATION;pH 8.3;277.15 K;1.29 M MgCl2, 22.5% PEG 3350, 0.1 M Tris pH 8.3, supplemented with 10% of an additive buffer containing 40% v/v of 2,5-Hexanediol
|
分辨率 2.09 Å R-free 0.238 |
| 6YOS Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pT524 pS617 peptide 提交 2020-04-15 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 C
518–530(13 aa)
链 C
611–623(13 aa)
|
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
EVAPORATION;pH 6.8;293.15 K;0.35 M MgCl2, 24.4% PEG 3350, 0. 1 M Bis Tris pH 5.5 supplemented with 10% of an additive buffer containing 0.06 M CHAPS, 0.06 M HEPES, 0.06 M Tris, 0.25% w/v Hexamminecobalt(III) chloride and 0.02 M HEPES sodium pH 6.8.
|
分辨率 2.75 Å R-free 0.261 |
| 7KRJ The GR-Maturation Complex: Glucocorticoid Receptor in complex with Hsp90 and co-chaperone p23 提交 2020-11-20 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 D
520–777(258 aa)
|
突变:F602S | ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 2 DEX DEXAMETHASONE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.56 Å |
| 7KW7 Atomic cryoEM structure of Hsp90-Hsp70-Hop-GR 提交 2020-11-30 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 F
1–777(777 aa)
|
突变:F602S | ADP ADENOSINE-5'-DIPHOSPHATE × 2 MG MAGNESIUM ION × 2 K POTASSIUM ION × 2 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 3.57 Å |
| 7PRV The glucocorticoid receptor in complex with fluticasone furoate, a PGC1a coactivator fragment and sgk 23bp 提交 2021-09-22 | Assembly 1 蛋白–DNA 异源复合物;蛋白 × 3 PDB 声明:pentameric(5) 与全部聚合物一致 |
链 A
385–777(393 aa)
链 B
385–777(393 aa)
|
突变:S404A, N517D, V571M, F602S, C638D 突变:S404A, N517D, V571M, F602S, C638D | ZN ZINC ION × 4 EDO 1,2-ETHANEDIOL × 3 GW6 (6alpha,11alpha,14beta,16alpha,17alpha)-6,9-difluoro-17-{[(fluoromethyl)sulfanyl]carbonyl}-11-hydroxy-16-methyl-3-oxoan drosta-1,4-dien-17-yl furan-2-carboxylate × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;8 % PEG3350, 0.3 M 1,6-hexanediol, 0.1 M guanidine hydrochloride, 8 % 2,2,2-trifluoroethanol, 0.1 M Bis Tris Propane pH 6.5
|
分辨率 2.70 Å R-free 0.253 |
| 7PRW The glucocorticoid receptor in complex with velsecorat, a PGC1a coactivator fragment and sgk 23bp 提交 2021-09-22 | Assembly 1 蛋白–DNA 异源复合物;蛋白 × 3 PDB 声明:pentameric(5) 与全部聚合物一致 |
链 A
385–777(393 aa)
链 B
385–777(393 aa)
|
突变:S404A, N517D, V571M, F602S, C638D 突变:S404A, N517D, V571M, F602S, C638D | ZN ZINC ION × 4 EDO 1,2-ETHANEDIOL × 6 82H Velsecorat × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;8.6 % PEG3350, 0.3 M 1,6-hexanediol, 0.1 M guanidine hydrochloride, 2 % 2,2,2-trifluoroethanol, 0.1 M BIS-TRIS propane pH 6.5
|
分辨率 2.50 Å R-free 0.263 |
| 7PRX wildtype ligand binding domain of the glucocorticoid receptor complexed with velsecorat and a PGC1a coactivator fragment 提交 2021-09-22 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
529–777(249 aa)
|
未记录 | 82H Velsecorat × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;18 % PEG8000, 2 % 2-Propanol, 0.1 M Sodium acetate, 0.1 M HEPES pH 7.5
|
分辨率 2.20 Å R-free 0.281 |
| 8A9G Binary complex of 14-3-3 zeta Glucocorticoid Receptor (GR) pT524 peptide stabilised by (R)-para chloropyrrolidone1 提交 2022-06-28 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
518–530(13 aa)
链 D
518–530(13 aa)
|
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) | BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL × 2 QJK 5-[(2~{R})-3-(4-chlorophenyl)carbonyl-2-(4-nitrophenyl)-4-oxidanyl-5-oxidanylidene-2~{H}-pyrrol-1-yl]-2-oxidanyl-benzoic acid × 2 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277.15 K;0.4 M MgCl2
27% w/v PEG 3350
0.1 M Bis Tris 6.5 pH
|
分辨率 1.96 Å R-free 0.261 |
| 8FFV Cryo-EM structure of the GR-Hsp90-FKBP52 complex 提交 2022-12-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
418–777(360 aa)
|
突变:F602S | ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 2 DEX DEXAMETHASONE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.01 Å |
| 8FFW Cryo-EM structure of the GR-Hsp90-FKBP51 complex 提交 2022-12-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
418–777(360 aa)
|
突变:F602S | ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 2 DEX DEXAMETHASONE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.23 Å |
| 8VKZ Crystal structure of Glucocorticoid Receptor in complex with an inhibitor 提交 2024-01-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
528–777(250 aa)
链 B
528–777(250 aa)
|
突变:V571M, F602S, C638D 突变:V571M, F602S, C638D | A1ACE (4aR,4bS,5R,6aS,6bS,8R,9aR,10aR,10bR)-8-{4-[(3-aminophenyl)methyl]phenyl}-5-hydroxy-6b-(hydroxyacetyl)-4a,6a-dimethyl-4a,4b,5,6,6a,6b,9a,10,10a,10b,11,12-dodecahydro-2H,8H-naphtho[2',1':4,5]indeno[1,2-d][1,3]dioxol-2-one × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 5.5;296 K;24% (w/v) PEG 400, 200 mM ammonium acetate, 100 mM sodium citrate pH 5.5
|
分辨率 2.13 Å R-free 0.245 |