当前蛋白身份:P0ABP8
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 1A69 PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX WITH FORMYCIN B AND SULPHATE (PHOSPHATE) 提交 1998-03-08 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
|
未记录 | SO4 SULFATE ION × 6 FMB FORMYCIN B × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 5.3;28-35% AMMONIUM SULPHATE, 50 MM CITRATE BUFFER, PH 5.2-5.4, pH 5.3
|
分辨率 2.10 Å |
| 1ECP PURINE NUCLEOSIDE PHOSPHORYLASE 提交 1995-07-13 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
链 D
1–238(238 aa)
链 E
1–238(238 aa)
链 F
1–238(238 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION | mmCIF 未提供已读取条件 | 分辨率 2.00 Å R-free 0.290 |
| 1K9S PURINE NUCLEOSIDE PHOSPHORYLASE FROM E. COLI IN COMPLEX WITH FORMYCIN A DERIVATIVE AND PHOSPHATE 提交 2001-10-30 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–237(237 aa)
链 B
1–237(237 aa)
链 C
1–237(237 aa)
链 D
1–237(237 aa)
链 E
1–237(237 aa)
链 F
1–237(237 aa)
|
未记录 | PO4 PHOSPHATE ION × 6 FM2 2-(7-AMINO-6-METHYL-3H-PYRAZOLO[4,3-D]PYRIMIDIN-3-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL × 3 FM1 2-HYDROXYMETHYL-5-(7-METHYLAMINO-3H-PYRAZOLO[4,3-D]PYRIMIDIN-3-YL)-TETRAHYDRO-FURAN-3,4-DIOL × 3 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;295 K;28-35% ammonium sulphate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.00 Å R-free 0.184 |
| 1OTX Purine Nucleoside Phosphorylase M64V mutant 提交 2003-03-23 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
|
突变:M64V 突变:M64V 突变:M64V | PO4 PHOSPHATE ION × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;295 K;50mM sodium citrate, 30%ammonium sulfate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.70 Å R-free 0.247 |
| 1OTY Native PNP +ALLO 提交 2003-03-23 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
|
未记录 | PO4 PHOSPHATE ION × 6 6MP 6-METHYLPURINE × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;295 K;50mM sodium citrate, 30% ammonium sulfate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.50 Å R-free 0.236 |
| 1OU4 Native PNP +Talo 提交 2003-03-24 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
|
未记录 | PO4 PHOSPHATE ION × 6 6MP 6-METHYLPURINE × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;295 K;50mM sodium Citrate, 30% ammonium sulfate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.50 Å R-free 0.244 |
| 1OUM M64V PNP +Talo 提交 2003-03-24 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
|
突变:M64V 突变:M64V 突变:M64V | TAL 9-(6-DEOXY-ALPHA-L-TALOFURANOSYL)-6-METHYLPURINE × 6 PO4 PHOSPHATE ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;295 K;50mM sodium citrate, 30% ammonium sulfate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.40 Å R-free 0.260 |
| 1OV6 M64V PNP + ALLO 提交 2003-03-25 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
片段:Purine Nuleoside Phosphorylase
链 B
1–238(238 aa)
片段:Purine Nuleoside Phosphorylase
链 C
1–238(238 aa)
片段:Purine Nuleoside Phosphorylase
|
突变:M64V 突变:M64V 突变:M64V | PO4 PHOSPHATE ION × 6 DBM 9-(6-DEOXY-BETA-D-ALLOFURANOSYL)-6-METHYLPURINE × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;295 K;50mM sodium citrate, 30% ammonium sulfate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.40 Å R-free 0.258 |
| 1OVG M64V PNP +MePdr 提交 2003-03-26 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–238(238 aa)
链 B
1–238(238 aa)
链 C
1–238(238 aa)
|
突变:M64V 突变:M64V 突变:M64V | PO4 PHOSPHATE ION × 6 MDR 9-(2-DEOXY-BETA-D-RIBOFURANOSYL)-6-METHYLPURINE × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.4;295 K;50mM sodium citrate, 30% ammonium sulfate , pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 2.20 Å R-free 0.259 |
| 3UT6 Crystal structure of E. Coli PNP complexed with PO4 and formycin A 提交 2011-11-25 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
2–238(237 aa)
链 B
2–238(237 aa)
链 C
2–238(237 aa)
|
未记录 | FMC (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol × 6 PO4 PHOSPHATE ION × 10 | X-RAY DIFFRACTION |
X-ray结晶条件
hanging drop;pH 5.2;291 K;50mM citrate buffer, 35% ammonium phosphate (w/v), pH 5.2, hanging drop, temperature 291K
|
分辨率 1.90 Å R-free 0.187 |
| 4TTI Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 4 FMC molecules 提交 2014-06-21 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:Hexameric(6) 与蛋白数一致 |
链 A
2–238(237 aa)
链 B
2–238(237 aa)
链 C
2–238(237 aa)
链 D
2–238(237 aa)
链 E
2–238(237 aa)
链 F
2–238(237 aa)
|
未记录 | FMC (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol × 4 PO4 PHOSPHATE ION × 6 SO4 SULFATE ION × 5 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.2;291 K;50 mM citric buffer, 34 % ammonium sulphate
|
分辨率 1.89 Å R-free 0.210 |
| 4TTJ Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 6 FMC molecules 提交 2014-06-21 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:Hexameric(6) 与蛋白数一致 |
链 A
2–238(237 aa)
链 B
2–238(237 aa)
链 D
2–238(237 aa)
|
未记录 | PO4 PHOSPHATE ION × 6 FMC (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol × 6 SO4 SULFATE ION × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.2;291 K;50 mM citric buffer, 32 % ammonium sulphate
|
分辨率 1.87 Å R-free 0.194 |
| 5IU6 Crystal structure of E.coli purine nucleoside phosphorylase with 7-deazahypoxanthine 提交 2016-03-17 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
2–238(237 aa)
链 B
2–238(237 aa)
链 C
2–238(237 aa)
|
未记录 | 7HX 7H-pyrrolo[2,3-d]pyrimidin-4-ol × 6 SO4 SULFATE ION × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
LIQUID DIFFUSION;294 K;AMMONIUM SULPHATE
|
分辨率 2.51 Å R-free 0.200 |
| 6XZ2 Crystal structure of E. Coli purine nucleoside phosphorylase mutant Y160W with SO4 and Formycin A 提交 2020-01-31 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
2–238(237 aa)
链 B
2–238(237 aa)
链 C
2–238(237 aa)
|
突变:Y160W 突变:Y160W 突变:Y160W | SO4 SULFATE ION × 6 FMC (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.2;291 K;50 mM citrate buffer pH 5.2, 14 % ammonium sulphate (w/v)
|
分辨率 1.65 Å R-free 0.192 |
| 6XZ2 Crystal structure of E. Coli purine nucleoside phosphorylase mutant Y160W with SO4 and Formycin A 提交 2020-01-31 | Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 A
2–238(237 aa)
链 B
2–238(237 aa)
链 C
2–238(237 aa)
|
突变:Y160W 突变:Y160W 突变:Y160W | SO4 SULFATE ION × 3 FMC (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.2;291 K;50 mM citrate buffer pH 5.2, 14 % ammonium sulphate (w/v)
|
分辨率 1.65 Å R-free 0.192 |
| 9FPE Wild type Purine Nucleoside Phosphorylase from E.coli in complex with N2,3-etheno-2-aminopurine 提交 2024-06-13 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–239(239 aa)
链 B
1–239(239 aa)
链 C
1–239(239 aa)
|
未记录 | GOL GLYCEROL × 6 A1IEC N,2,3-etheno-2-aminopurine × 6 PO4 PHOSPHATE ION × 6 SO4 SULFATE ION × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.2;291 K;Citrate buffer pH 5.2, amonium sulphate 15% w/v
|
分辨率 1.35 Å R-free 0.213 |
| 9FXE D204N mutant of Purine Nucleoside Phosphorylase from E.coli in complex with N2,3-etheno-2-aminopurine 提交 2024-07-01 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 A
1–239(239 aa)
链 B
1–239(239 aa)
链 C
1–239(239 aa)
|
未记录 | PO4 PHOSPHATE ION × 6 A1IEC N,2,3-etheno-2-aminopurine × 6 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.2;291 K;Citrate buffer pH 5.2, amonium sulphate 24% w/v
|
分辨率 2.12 Å R-free 0.233 |