Current Protein Identity:P0AG96 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
3J45 Structure of a non-translocating SecY protein channel with the 70S ribosome Deposited 2013-06-18 Assembly 1 Protein–RNA Heteromer;Protein × 6 PDB declaration: undecameric(11) Consistent with all polymers
Chain E 74–127(54 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer 50 mM HEPES-KOH, 100 mM KOAc, 10 mM Mg(OAc)2, 0.05% DDM;pH 7.5;50 mM HEPES-KOH, 100 mM KOAc, 10 mM Mg(OAc)2, 0.05% DDM
cryo-EM vitrification conditions 90 K;Cryogen ETHANE;Blot 1 second before plunging into liquid ethane (HOMEMADE PLUNGER).
Resolution 9.50 Å
3J46 Structure of the SecY protein translocation channel in action Deposited 2013-06-18 Assembly 1 Protein–RNA Heteromer;Protein × 8 PDB declaration: tetradecameric(14) Consistent with all polymers
Chain E 74–127(54 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer 50 mM Tris-acetate, 10 mM Mg(OAc)2, 80 mM KOAc, 0.06% DDM;pH 7.2;50 mM Tris-acetate, 10 mM Mg(OAc)2, 80 mM KOAc, 0.06% DDM
cryo-EM vitrification conditions 77 K;Cryogen ETHANE;Blot 1-2 seconds before plunging into liquid ethane (FEI VITROBOT MARK III).
Resolution 10.10 Å
5GAE RNC in complex with a translocating SecYEG Deposited 2015-11-25 Assembly 1 Protein–RNA Heteromer;Protein × 33 PDB declaration: 36-meric(36) Consistent with all polymers
Chain h 1–127(127 aa)
Not recorded MG MAGNESIUM ION × 323 ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
5MG3 EM fitted model of bacterial holo-translocon Deposited 2016-11-20 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain E 3–127(125 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 14.00 Å
5NCO Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome Deposited 2017-03-06 Assembly 1 Protein–RNA Heteromer;Protein × 36 PDB declaration: 40-meric(40) Consistent with all polymers
Chain h 67–122(56 aa)
Not recorded ZN ZINC ION × 1 ALF TETRAFLUOROALUMINATE ION × 2 MG MAGNESIUM ION × 2 GDP GUANOSINE-5'-DIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.80 Å
9RBF Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC Deposited 2025-05-22 Assembly 1 Protein–RNA Heteromer;Protein × 54 PDB declaration: 61-meric(61) Consistent with all polymers
Chain 7 1–127(127 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY mmCIF provides none of the parsed conditions Resolution 2.44 Å