当前蛋白身份:P16144
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 1QG3 CRYSTAL STRUCTURE OF A TANDEM PAIR OF FIBRONECTIN TYPE III DOMAINS FROM THE CYTOPLASMIC TAIL OF INTEGRIN ALPHA6 BETA4 提交 1999-04-19 | Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
1126–1320(195 aa)
片段:FIRST TANDEM PAIR OF FIBRONECTIN TYPE III DOMAINS
链 B
1126–1320(195 aa)
片段:FIRST TANDEM PAIR OF FIBRONECTIN TYPE III DOMAINS
|
未记录 | CAC CACODYLATE ION × 2 SO4 SULFATE ION × 3 | X-RAY DIFFRACTION |
X-ray结晶条件
pH 6.2;100 MM CACODYLIC ACID/NAOH PH 6.2 200 MM LI2SO4 30% 400 MM POLYETHYLENE GLYCOL
|
分辨率 2.15 Å R-free 0.262 |
| 2YRZ Solution structure of the fibronectin type III domain of human Integrin beta-4 提交 2007-04-03 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
1518–1622(105 aa)
片段:fn3
|
未记录 | 未记录非水小分子 | SOLUTION NMR |
NMR测量条件
pH 7;296 K;离子强度(mmCIF原始值)120mM;压力 ambient
NMR样品组成
1.21mM sample U-15N,13C; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O
|
分辨率未提供 |
| 3F7P Crystal structure of a complex between integrin beta4 and plectin 提交 2008-11-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 C
1126–1370(245 aa)
片段:Fibronectin type-III, residues 1126-1370
|
未记录 | EDO 1,2-ETHANEDIOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 5.8;298 K;0.1M Sodium Acetate, 0.2M CaCl2, 10% PEG 6000, pH 5.8, VAPOR DIFFUSION, temperature 298K
|
分辨率 2.75 Å R-free 0.257 |
| 3F7P Crystal structure of a complex between integrin beta4 and plectin 提交 2008-11-10 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 D
1126–1370(245 aa)
片段:Fibronectin type-III, residues 1126-1370
|
未记录 | EDO 1,2-ETHANEDIOL × 1 PEG DI(HYDROXYETHYL)ETHER × 1 CA CALCIUM ION × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 5.8;298 K;0.1M Sodium Acetate, 0.2M CaCl2, 10% PEG 6000, pH 5.8, VAPOR DIFFUSION, temperature 298K
|
分辨率 2.75 Å R-free 0.257 |
| 3F7P Crystal structure of a complex between integrin beta4 and plectin 提交 2008-11-10 | Assembly 3 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 E
1126–1370(245 aa)
片段:Fibronectin type-III, residues 1126-1370
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 5.8;298 K;0.1M Sodium Acetate, 0.2M CaCl2, 10% PEG 6000, pH 5.8, VAPOR DIFFUSION, temperature 298K
|
分辨率 2.75 Å R-free 0.257 |
| 3F7Q First pair of Fibronectin type III domains and part of the connecting segment of the integrin beta4 提交 2008-11-10 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
1126–1355(230 aa)
片段:Fibronectin type-III, residues 1126-1355
|
未记录 | CL CHLORIDE ION × 1 PEG DI(HYDROXYETHYL)ETHER × 1 1PE PENTAETHYLENE GLYCOL × 1 EDO 1,2-ETHANEDIOL × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 7.5;298 K;0.1M Tris-HCl, 0.3M NaCl, 24% PEG 200, pH 7.5, VAPOR DIFFUSION, temperature 298K
|
分辨率 1.75 Å R-free 0.182 |
| 3F7Q First pair of Fibronectin type III domains and part of the connecting segment of the integrin beta4 提交 2008-11-10 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
1126–1355(230 aa)
片段:Fibronectin type-III, residues 1126-1355
|
未记录 | CL CHLORIDE ION × 1 PEG DI(HYDROXYETHYL)ETHER × 1 EDO 1,2-ETHANEDIOL × 1 PG4 TETRAETHYLENE GLYCOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 7.5;298 K;0.1M Tris-HCl, 0.3M NaCl, 24% PEG 200, pH 7.5, VAPOR DIFFUSION, temperature 298K
|
分辨率 1.75 Å R-free 0.182 |
| 3F7R First pair of Fibronectin type III domains and part of the connecting segment of the integrin beta4 提交 2008-11-10 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
1126–1370(245 aa)
片段:Fibronectin type-III, residues 1126-1370
|
未记录 | CL CHLORIDE ION × 1 PEG DI(HYDROXYETHYL)ETHER × 2 EDO 1,2-ETHANEDIOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION;pH 6.5;298 K;0.1M Cacodylate, 18.75% PEG 600, 6.25% Glycerol, 0.7M NaCl, pH 6.5, VAPOR DIFFUSION, temperature 298K
|
分辨率 2.04 Å R-free 0.215 |
| 3FQ4 Crystal structure of the Calx-beta domain of integrin beta4 提交 2009-01-07 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
989–1107(119 aa)
片段:Calx-beta domain, residues 989-1107
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.3;298 K;50mM Tris-HCl, 26% PEG 1500, pH 8.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.49 Å R-free 0.189 |
| 3FQ4 Crystal structure of the Calx-beta domain of integrin beta4 提交 2009-01-07 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
989–1107(119 aa)
片段:Calx-beta domain, residues 989-1107
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.3;298 K;50mM Tris-HCl, 26% PEG 1500, pH 8.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.49 Å R-free 0.189 |
| 3FSO Crystal structure of the Calx-beta domain of integrin beta4, calcium soak 提交 2009-01-11 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
989–1107(119 aa)
片段:Calx-beta domain, residues 989-1107
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.3;298 K;50mM Tris-HCl, 26% PEG 1500; CRYSTAL WAS SOAKED IN 50mM Tris-HCl, 25% PEG 1500, 10mM CaCl2 PRIOR TO DATA COLLECTION, pH 8.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.41 Å R-free 0.211 |
| 3FSO Crystal structure of the Calx-beta domain of integrin beta4, calcium soak 提交 2009-01-11 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
989–1107(119 aa)
片段:Calx-beta domain, residues 989-1107
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.3;298 K;50mM Tris-HCl, 26% PEG 1500; CRYSTAL WAS SOAKED IN 50mM Tris-HCl, 25% PEG 1500, 10mM CaCl2 PRIOR TO DATA COLLECTION, pH 8.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.41 Å R-free 0.211 |
| 3H6A Structure of the Calx-beta domain of integrin beta4 crystallized in the presence of calcium 提交 2009-04-23 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
989–1107(119 aa)
片段:CALX-BETA DOMAIN, RESIDUES 989-1107
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.9;298 K;50MM TRIS-HCL, 2MM CACL2, 26% PEG 1500, pH 7.9, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.61 Å R-free 0.212 |
| 3H6A Structure of the Calx-beta domain of integrin beta4 crystallized in the presence of calcium 提交 2009-04-23 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
989–1107(119 aa)
片段:CALX-BETA DOMAIN, RESIDUES 989-1107
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.9;298 K;50MM TRIS-HCL, 2MM CACL2, 26% PEG 1500, pH 7.9, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 1.61 Å R-free 0.212 |
| 4Q58 Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex 提交 2014-04-16 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 D
1126–1320(195 aa)
片段:fibronectin type III domains 1 and 2 (UNP residues 1126-1320)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;20 mM HEPES, pH 6.5, 150 mM sodium formate, 7.5% PEG550 MME, 3% sucrose, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 4.00 Å R-free 0.287 |
| 4Q58 Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex 提交 2014-04-16 | Assembly 3 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 C
1126–1320(195 aa)
片段:fibronectin type III domains 1 and 2 (UNP residues 1126-1320)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;20 mM HEPES, pH 6.5, 150 mM sodium formate, 7.5% PEG550 MME, 3% sucrose, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
分辨率 4.00 Å R-free 0.287 |
| 4WTW Crystal structure of the third FnIII domain of integrin beta4 提交 2014-10-30 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
1457–1548(92 aa)
片段:Third FnIII domain, UNP residues 1457-1548
|
未记录 | SO4 SULFATE ION × 2 1PE PENTAETHYLENE GLYCOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;0.1 M Tris-HCl, 12.5% glycerol, 36% PEG 600, 0.5 M (NH4)2SO4
|
分辨率 1.61 Å R-free 0.180 |
| 4WTW Crystal structure of the third FnIII domain of integrin beta4 提交 2014-10-30 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
1457–1548(92 aa)
片段:Third FnIII domain, UNP residues 1457-1548
|
未记录 | EDO 1,2-ETHANEDIOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;0.1 M Tris-HCl, 12.5% glycerol, 36% PEG 600, 0.5 M (NH4)2SO4
|
分辨率 1.61 Å R-free 0.180 |
| 4WTX Crystal structure of the fourth FnIII domain of integrin beta4 提交 2014-10-30 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
1572–1666(95 aa)
片段:Fourth FnIII domain, UNP residues 1572-1666
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7;277 K;0.1 M Sodium Acetate (pH 4.2), 0.7 M NaH2PO4, 1.05 M K2HPO4, 2 mM DTT
|
分辨率 1.50 Å R-free 0.218 |
| 6GVK Second pair of Fibronectin type III domains of integrin beta4 (T1663R mutant) bound to the bullous pemphigoid antigen BP230 (BPAG1e) 提交 2018-06-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
1527–1736(210 aa)
|
突变:T1663R | GOL GLYCEROL × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5;298 K;0.1 M Na-acetate (pH 5.0), 20% PEG 6000, 0.2 M MgCl2
|
分辨率 1.55 Å R-free 0.210 |
| 6GVL Second pair of Fibronectin type III domains of integrin beta4 bound to the bullous pemphigoid antigen BP230 (BPAG1e) 提交 2018-06-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
1527–1736(210 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 4.2;298 K;0.1 phosphate-citrate pH 4.2, 20% PEG 8000, 0.2 M NaCl
|
分辨率 2.05 Å R-free 0.236 |