Current Protein Identity:P25627 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
4QTT Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (apo-form) Deposited 2014-07-09 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 1–202(202 aa) Fragment:fragment residues 1-202
Non-standard monomer:Yes (specific site not provided by mmCIF) ZN ZINC ION × 1 EDO 1,2-ETHANEDIOL × 4 12P DODECAETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;291 K;pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.00 Å R-free 0.242
4QTT Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (apo-form) Deposited 2014-07-09 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain D 1–202(202 aa) Fragment:fragment residues 1-202
Non-standard monomer:Yes (specific site not provided by mmCIF) ZN ZINC ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;291 K;pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.00 Å R-free 0.242
4QTU Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (SAM bound form) Deposited 2014-07-09 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 1–202(202 aa) Fragment:fragment residues 1-202
Non-standard monomer:Yes (specific site not provided by mmCIF) ZN ZINC ION × 1 EDO 1,2-ETHANEDIOL × 16 SAM S-ADENOSYLMETHIONINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;291 K;pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.12 Å R-free 0.229
4QTU Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (SAM bound form) Deposited 2014-07-09 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain D 1–202(202 aa) Fragment:fragment residues 1-202
Non-standard monomer:Yes (specific site not provided by mmCIF) ZN ZINC ION × 1 EDO 1,2-ETHANEDIOL × 3 SAM S-ADENOSYLMETHIONINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;291 K;pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.12 Å R-free 0.229
7WTN Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (with Rps2) Deposited 2022-02-05 Assembly 1 Protein–RNA Heteromer;Protein × 17 PDB declaration: octadecameric(18) Consistent with all polymers
Chain CB 1–275(275 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
7WTP Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (with Rps2) Deposited 2022-02-05 Assembly 1 Protein–RNA Heteromer;Protein × 18 PDB declaration: nonadecameric(19) Consistent with all polymers
Chain CB 1–275(275 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
7WTQ Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (without Rps2) Deposited 2022-02-05 Assembly 1 Protein–RNA Heteromer;Protein × 17 PDB declaration: octadecameric(18) Consistent with all polymers
Chain CB 1–275(275 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.70 Å
7WTR Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3 Deposited 2022-02-05 Assembly 1 Protein–RNA Heteromer;Protein × 18 PDB declaration: nonadecameric(19) Consistent with all polymers
Chain CB 1–275(275 aa)
Not recorded ZN ZINC ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å