Current Protein Identity:P26349 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1JRJ Solution structure of exendin-4 in 30-vol% trifluoroethanol Deposited 2001-08-13 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–39(39 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 5.9;280 K;Ionic strength (raw mmCIF value) 15mM potassium phosphate;Pressure ambient
NMR sample composition Natural abundance | 2mg/ml in pH 5.9 15mM phosphate buffer with 30 vol-% trifluoroethanol added
Resolution not provided
3C59 Crystal structure of the ligand-bound glucagon-like peptide-1 receptor extracellular domain Deposited 2008-01-31 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 56–86(31 aa) Fragment:UNP residues 56-86
Non-standard monomer:Yes (specific site not provided by mmCIF) 10M decyl 4-O-alpha-D-glucopyranosyl-1-thio-beta-D-glucopyranoside × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl pH 8.5, 0.1M MgCl2, 0.4M MgTartrate, 9mM n-Decyl-beta-D-thiomaltoside, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.30 Å R-free 0.241
3C5T Crystal structure of the ligand-bound glucagon-like peptide-1 receptor extracellular domain Deposited 2008-02-01 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 56–86(31 aa) Fragment:UNP residues 56-86
Not recorded 10M decyl 4-O-alpha-D-glucopyranosyl-1-thio-beta-D-glucopyranoside × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 8.5;293 K;0.1M Tris-HCl pH 8.5, 0.1M MgCl2, 0.4M MgTartrate, 9mM n-Decyl-beta-D-thiomaltoside, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.10 Å R-free 0.238
5OTT Extracellular domain of GLP-1 receptor in complex with exendin-4 variant Gly2Hcs/Thr5Hcs Deposited 2017-08-22 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 48–86(39 aa)
Mutation:G2HCS, T5HCS Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;0.1 M Imidazole pH 6.5, 1.0 M Sodium acetate trihydrate
Resolution 1.92 Å R-free 0.209
6GDZ exendin-4 based dual GLP-1/glucagon receptor agonist Deposited 2018-04-25 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 48–86(39 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) EVT (2~{S})-2-[[(4~{S})-4-(hexadecanoylamino)-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]pentanedioic acid × 1 SOLUTION NMR
NMR measurement conditions pH 5;310 K;Ionic strength (raw mmCIF value) 35mM sodium phosphate;Pressure 1
NMR sample composition 5 mg/mL Peptide 5, trifluoroethanol/water | trifluoroethanol/water
Resolution not provided
6GE2 exendin-4 based dual GLP-1/glucagon receptor agonist Deposited 2018-04-25 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 48–86(39 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) EVT (2~{S})-2-[[(4~{S})-4-(hexadecanoylamino)-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]pentanedioic acid × 1 SOLUTION NMR
NMR measurement conditions pH 5;310 K;Ionic strength (raw mmCIF value) 35mM sodium phosphate;Pressure 1
NMR sample composition 5 mg/mL Peptide 12, trifluoroethanol/water | trifluoroethanol/water
Resolution not provided
7LLL Exendin-4-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in complex with Gs protein Deposited 2021-02-04 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain P 48–86(39 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.70 Å
7MLL Solution structure of Exenatide (exendin-4) in 30-vol% trifluoroethanol using CS-Rosetta Deposited 2021-04-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 48–86(39 aa) Fragment:UNP Residue 48-86
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 5.35;315 K;Ionic strength (raw mmCIF value) 20;Pressure 1
NMR sample composition 13 mM 'NA-' Exenatide (exendin-4), 20 mM 'NA-' sodium phosphate, 30 % v/v [U-99% 2H] TFE, 10 % v/v [U-99% 2H] D2O, 0.01 mg/mL 'NA-' DSS, 60 % H2O/30%Trifluoroethanol/10 % D2O | 60 % H2O/30%Trifluoroethanol/10 % D2O
Resolution not provided
9G0M Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 288K Deposited 2024-07-08 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7;288 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.8 mM polypeptide, 1 % sodium-azide, 1 % DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G0N Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 299K Deposited 2024-07-08 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7;299 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.8 mM non-labelled polypeptide, 1 % non-labelled sodium-azide, 1 % non-labelled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G20 Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 310K Deposited 2024-07-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7;310 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.8 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G21 Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 321K Deposited 2024-07-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7;321 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.8 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G22 Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bDR) at 277K Deposited 2024-07-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7.1;277 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.85 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G2N Trp-cage fortified Tc5b-Exenatide chimera ( Ex-4-Tc5bDR) at 288K Deposited 2024-07-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7.1;288 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.85 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G2O Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 299K Deposited 2024-07-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7.1;299 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.85 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G31 Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 310K Deposited 2024-07-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7.1;310 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.85 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G32 Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 321K Deposited 2024-07-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7.1;321 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.85 mM non-labeld polypeptide, 1 mM non-labeld sodium azide, 1 % non-labeld DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
9G5P Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 277K Deposited 2024-07-17 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 62–86(25 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7;277 K;Ionic strength (raw mmCIF value) n.d.;Pressure 1
NMR sample composition 0.8 mM non-labeled polypeptide, 1 % non-labeled sodium azide, 1 % non-labeled DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided