当前蛋白身份:P32447 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1ROC Crystal structure of the histone deposition protein Asf1 提交 2003-12-02 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 2–154(153 aa)
未记录 BR BROMIDE ION × 9 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.5;291 K;PEG 3350, sodium bromide, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
分辨率 1.50 Å R-free 0.246
1WG3 Structural analysis of yeast nucleosome-assembly factor CIA1p 提交 2004-05-27 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1–169(169 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;PEG8K, AS, Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 3.00 Å R-free 0.274
2HUE Structure of the H3-H4 chaperone Asf1 bound to histones H3 and H4 提交 2006-07-26 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 2–169(168 aa) 片段:residues 2-169
未记录 ZN ZINC ION × 1 GOL GLYCEROL × 2 SO4 SULFATE ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;295 K;0.1M potassium sulfate, 0.1M Tris-HCl, 14.5% PEG 4K, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
分辨率 1.70 Å R-free 0.239
2HUE Structure of the H3-H4 chaperone Asf1 bound to histones H3 and H4 提交 2006-07-26 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 2–169(168 aa) 片段:residues 2-169
未记录 ZN ZINC ION × 2 GOL GLYCEROL × 4 SO4 SULFATE ION × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;295 K;0.1M potassium sulfate, 0.1M Tris-HCl, 14.5% PEG 4K, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
分辨率 1.70 Å R-free 0.239
2HUE Structure of the H3-H4 chaperone Asf1 bound to histones H3 and H4 提交 2006-07-26 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 2–169(168 aa) 片段:residues 2-169
未记录 ZN ZINC ION × 2 GOL GLYCEROL × 4 SO4 SULFATE ION × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;295 K;0.1M potassium sulfate, 0.1M Tris-HCl, 14.5% PEG 4K, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
分辨率 1.70 Å R-free 0.239
2HUE Structure of the H3-H4 chaperone Asf1 bound to histones H3 and H4 提交 2006-07-26 Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 2–169(168 aa) 片段:residues 2-169
未记录 ZN ZINC ION × 2 GOL GLYCEROL × 4 SO4 SULFATE ION × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;295 K;0.1M potassium sulfate, 0.1M Tris-HCl, 14.5% PEG 4K, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
分辨率 1.70 Å R-free 0.239
2IDC Structure of the Histone H3-Asf1 Chaperone Interaction 提交 2006-09-14 Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 2–155(154 aa) 片段:Asf1, residues 2-155 and H3, residues 121-134
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;292 K;Tris-HCl, Li2SO4, PEG 4000, glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K
分辨率 2.20 Å R-free 0.239
2YGV Conserved N-terminal domain of the yeast Histone Chaperone Asf1 in complex with the C-terminal fragment of Rad53 提交 2011-04-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 1–156(156 aa) 片段:CONSERVED N-TERMINAL DOMAIN, RESIDUES 1-156
未记录 SO4 SULFATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;5% PEG 8000, 0.1M NACACO PH 6, 0.2M MG ACETATE
分辨率 2.94 Å R-free 0.257
2YGV Conserved N-terminal domain of the yeast Histone Chaperone Asf1 in complex with the C-terminal fragment of Rad53 提交 2011-04-21 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 1–156(156 aa) 片段:CONSERVED N-TERMINAL DOMAIN, RESIDUES 1-156
未记录 SO4 SULFATE ION × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;5% PEG 8000, 0.1M NACACO PH 6, 0.2M MG ACETATE
分辨率 2.94 Å R-free 0.257
2YGV Conserved N-terminal domain of the yeast Histone Chaperone Asf1 in complex with the C-terminal fragment of Rad53 提交 2011-04-21 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 C 1–156(156 aa) 片段:CONSERVED N-TERMINAL DOMAIN, RESIDUES 1-156
未记录 SO4 SULFATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;5% PEG 8000, 0.1M NACACO PH 6, 0.2M MG ACETATE
分辨率 2.94 Å R-free 0.257
2YGV Conserved N-terminal domain of the yeast Histone Chaperone Asf1 in complex with the C-terminal fragment of Rad53 提交 2011-04-21 Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 1–156(156 aa) 片段:CONSERVED N-TERMINAL DOMAIN, RESIDUES 1-156
未记录 SO4 SULFATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;5% PEG 8000, 0.1M NACACO PH 6, 0.2M MG ACETATE
分辨率 2.94 Å R-free 0.257
4EO5 Yeast Asf1 bound to H3/H4G94P mutant 提交 2012-04-13 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 2–169(168 aa) 片段:residues 2-169
未记录 ACT ACETATE ION × 2 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.9;298 K;7.14% PEG 3350, 0.2 M Magnesium Acetate, pH 7.9, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 2.35 Å R-free 0.240
4ZBJ UBN1 peptide bound to H3.3/H4/Asf1 提交 2015-04-14 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 2–169(168 aa) 片段:UNP residues 2-169
未记录 CL CHLORIDE ION × 8 MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;295 K;0.1 M Sodium Cacodylate pH 6.0, 8% PEG 8K, 0.2 M NaCl
分辨率 2.25 Å R-free 0.235
5EII Structural determination of an protein complex of a Fab with increased solubility 提交 2015-10-29 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 I 1–156(156 aa) 片段:UNP residues 1-156
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 LIQUID DIFFUSION;293 K;Crystals were grown by hanging drop liquid diffusion by adding a solution containing 20% PEG 3350 and Sodium Acetate, pH 5.5
分辨率 2.44 Å R-free 0.233
5EII Structural determination of an protein complex of a Fab with increased solubility 提交 2015-10-29 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 G 1–156(156 aa) 片段:UNP residues 1-156
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 LIQUID DIFFUSION;293 K;Crystals were grown by hanging drop liquid diffusion by adding a solution containing 20% PEG 3350 and Sodium Acetate, pH 5.5
分辨率 2.44 Å R-free 0.233
5UCB Structure of antigen-Fab complex with engineered switch residue region. 提交 2016-12-22 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;298 K;18% PEG3350,
分辨率 1.52 Å R-free 0.169
5UEA Structure of antigen-Fab complex with Histone chaperone ASF1 提交 2016-12-29 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 X 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;298 K;20% PEG 3350, .2 M Ammonium chloride
分辨率 1.70 Å R-free 0.207
5UEA Structure of antigen-Fab complex with Histone chaperone ASF1 提交 2016-12-29 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 D 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;298 K;20% PEG 3350, .2 M Ammonium chloride
分辨率 1.70 Å R-free 0.207
5UEK Structure of antigen-Fab 12E complex with Histone chaperone ASF1 提交 2017-01-02 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;298 K;20% PEG 3350, 20% ethylene glycol, .2 M Ammonium Acetate
分辨率 1.70 Å R-free 0.212
6AYZ Crystal structure of Asf1-Fab 12E complex 提交 2017-09-08 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.1;298 K;0.2 M Ammonium Acetate, 20% PEG 3350
分辨率 2.10 Å R-free 0.236
6AYZ Crystal structure of Asf1-Fab 12E complex 提交 2017-09-08 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 M 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.1;298 K;0.2 M Ammonium Acetate, 20% PEG 3350
分辨率 2.10 Å R-free 0.236
6AZ2 Crystal structure of Asf1-Fab 12E complex 提交 2017-09-09 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.1;298 K;20% PEG3350, 0.2 M ammonium acetate
分辨率 2.48 Å R-free 0.228
6AZ2 Crystal structure of Asf1-Fab 12E complex 提交 2017-09-09 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 D 2–154(153 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.1;298 K;20% PEG3350, 0.2 M ammonium acetate
分辨率 2.48 Å R-free 0.228
6F0Y Rtt109 peptide bound to Asf1 提交 2017-11-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 2–169(168 aa)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 6.2;298 K;离子强度(mmCIF原始值)150;压力 ambient
NMR测量条件 pH 6.2;298 K;离子强度(mmCIF原始值)150;压力 ambient
NMR样品组成 0.5 mM [U-99% 13C; U-99% 15N] Histone chaperone Asf1, 3 mM histone acetyltransferase Rtt109 C-terminus, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.15 mM [U-99% 13C; U-99% 15N] Histone chaperone Asf1, 0.5 mM histone acetyltransferase Rtt109 C-terminus, 100% D2O | 100% D2O
NMR样品组成 0.5 mM [U-99% 13C; U-99% 15N; U-99% 2D] Histone chaperone ASF1, 0.15 mM histone acetyltransferase Rtt109 C-terminus, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
6O22 Structure of Asf1-H3:H4-Rtt109-Vps75 histone chaperone-lysine acetyltransferase complex with the histone substrate. 提交 2019-02-22 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 D 2–279(278 aa)
未记录 未记录非水小分子 未声明
NMR测量条件 pH 6.5;298 K;离子强度(mmCIF原始值)150;压力 1
NMR样品组成 70 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 70 uM Rtt109, 70 uM Asf1, 70 uM H3, 70 uM H4, 100% D2O | 100% D2O
NMR样品组成 70 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 70 uM Rtt109, 70 uM Asf1, 70 uM H3(110A,63C) mutant with a cysteine coupled to a paramagnetic tag, 70 uM H4, 100% D2O | 100% D2O
NMR样品组成 90 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 90 uM Rtt109, 90 uM Asf1, 90 uM H3(110A,76C) mutant with a cysteine coupled to a paramagnetic tag, 90 uM H4, 100% D2O | 100% D2O
NMR样品组成 30 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 30 uM Rtt109, 30 uM Asf1, 30 uM H3, 30 uM H4(30C) mutant with a cysteine coupled to a paramagnetic tag, 100% D2O | 100% D2O
NMR样品组成 70 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 70 uM Rtt109, 70 uM Asf1, 70 uM H3, 70 uM H4(82C) mutant with a cysteine coupled to a paramagnetic tag, 100% D2O | 100% D2O
NMR样品组成 80 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 80 uM Rtt109, 80 uM Asf1, 80 uM H3, 80 uM H4(45C) mutant with a cysteine coupled to a paramagnetic tag, 100% D2O | 100% D2O
NMR样品组成 30 uM ILV methyl labelled, perdeuterated Vps75 (dimer), 30 uM Rtt109, 30 uM Asf1, 30 uM H3, 30 uM H4(93C) mutant with a cysteine coupled to a paramagnetic tag, 100% D2O | 100% D2O
分辨率未提供
9AVO The crystal structure of an engineered Protein GD with Human Kappa Fab 提交 2024-03-04 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 2–159(158 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;0.1M Sodium cacodylate pH 6.8 and 0.8M Sodium citrate tribasic
分辨率 3.00 Å R-free 0.241
9AWE The crystal structure of an engineered Protein GF with Human Kappa Fab 提交 2024-03-05 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 2–159(158 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;0.1M Sodium Cacodylate pH 6.0, 0.1M Calcium acetate hydrate, 10% PEG 8000
分辨率 2.80 Å R-free 0.293