当前蛋白身份:P78356 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 配体/离子不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1BO1 PHOSPHATIDYLINOSITOL PHOSPHATE KINASE TYPE II BETA 提交 1998-08-02 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 1–416(416 aa)
链 B 1–416(416 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 pH 5.6;100MM SODIUM CITRATE PH5.6 200MM MAGNESIUM ACETATE 100MM LITHIUM ACETATE 16% PEG (4000)
分辨率 3.00 Å R-free 0.299
3WZZ Crystal structure of PIP4KIIBETA 提交 2014-10-08 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE CONTAININ, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.260
3X01 Crystal structure of PIP4KIIBETA complex with AMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
未记录 AMP ADENOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE CONTAINING 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.15 Å R-free 0.279
3X02 Crystal structure of PIP4KIIBETA complex with GMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
未记录 5GP GUANOSINE-5'-MONOPHOSPHATE × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE CONTAINING 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.45 Å R-free 0.255
3X03 Crystal structure of PIP4KIIBETA complex with AMPPNP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.70 Å R-free 0.280
3X04 Crystal structure of PIP4KIIBETA complex with GMPPNP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
未记录 GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.277
3X05 Crystal structure of PIP4KIIBETA T201M complex with AMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:T201M 突变:T201M AMP ADENOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.50 Å R-free 0.273
3X06 Crystal structure of PIP4KIIBETA T201M complex with GMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:T201M 突变:T201M 5GP GUANOSINE-5'-MONOPHOSPHATE × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.65 Å R-free 0.261
3X07 Crystal structure of PIP4KIIBETA N203A complex with AMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:N203A 突变:N203A AMP ADENOSINE MONOPHOSPHATE × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.270
3X08 Crystal structure of PIP4KIIBETA N203A complex with GMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:N203A 突变:N203A 5GP GUANOSINE-5'-MONOPHOSPHATE × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.75 Å R-free 0.267
3X09 Crystal structure of PIP4KIIBETA F205L complex with AMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:F205L 突变:F205L AMP ADENOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.70 Å R-free 0.260
3X0A Crystal structure of PIP4KIIBETA F205L complex with GMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:F205L 突变:F205L 5GP GUANOSINE-5'-MONOPHOSPHATE × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.272
3X0B Crystal structure of PIP4KIIBETA I368A complex with AMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:I368A 突变:I368A AMP ADENOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.282
3X0C Crystal structure of PIP4KIIBETA I368A complex with GMP 提交 2014-10-09 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa) 片段:UNP RESIDUES 31-416
链 B 31–416(386 aa) 片段:UNP RESIDUES 31-416
突变:I368A 突变:I368A 5GP GUANOSINE-5'-MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;277 K;100MM NA-CITRATE, 10MM MG-ACETATE, 100MM LI-ACETATE, 8-14%(V/V) PEG4000, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.55 Å R-free 0.268
6K4G Crystal structure of the PI5P4Kbeta-GMPPNP complex 提交 2019-05-23 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
未记录 GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;pH 6.1;293 K;9%(w/v) PEG4000, 0.1M sodium citrate pH 6.0, 0.1M magnesium acetate, 0.1M lithium acetate
分辨率 2.70 Å R-free 0.275
6K4H Crystal structure of the PI5P4Kbeta-AMPPNP complex 提交 2019-05-23 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
未记录 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;293 K;9%(w/v) PEG4000, 0.1M sodium citrate pH 6.0, 0.1M magnesium acetate, 0.1M lithium acetate
分辨率 2.55 Å R-free 0.282
7EM1 Crystal structure of the PI5P4Kbeta-ITP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
未记录 IDP INOSINE-5'-DIPHOSPHATE × 2 CZU [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1 M sodium citrate pH 6.0, 0.1 M magnesium acetate, 0.1 M lithium acetate
分辨率 2.65 Å R-free 0.266
7EM2 Crystal structure of the PI5P4Kbeta-XTP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
未记录 CZC [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate × 2 CZF [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1 M sodium citrate pH 6.0, 0.1 M magnesium acetate, 0.1 M lithium acetate
分辨率 2.60 Å R-free 0.258
7EM3 Crystal structure of the PI5P4Kbeta-2a-ATP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
未记录 CX0 [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate × 1 CXC [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1 M sodium citrate pH 6.0, 0.1 M magnesium acetate, 0.1 M lithium acetate
分辨率 3.10 Å R-free 0.256
7EM4 Crystal structure of the PI5P4Kbeta F205L-ITP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
突变:F205L 突变:F205L IDP INOSINE-5'-DIPHOSPHATE × 2 CZU [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1 M sodium citrate pH 6.0, 0.1 M magnesium acetate, 0.1 M lithium acetate
分辨率 2.80 Å R-free 0.278
7EM5 Crystal structure of the PI5P4Kbeta F205L-XTP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
突变:F205L 突变:F205L CZC [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate × 2 CZF [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1 M sodium citrate pH 6.0, 0.1 M magnesium acetate, 0.1 M lithium acetate
分辨率 2.80 Å R-free 0.261
7EM6 Crystal structure of the PI5P4Kbeta N203D-ITP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
突变:N203D 突变:N203D IDP INOSINE-5'-DIPHOSPHATE × 2 CZU [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1M sodium citrate pH 6.0, 0.1M magnesium acetate, 0.1M lithium acetate
分辨率 2.95 Å R-free 0.268
7EM7 Crystal structure of the PI5P4Kbeta N203D-XTP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
未记录 CZC [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate × 1 CZF [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;293 K;9%(W/V) PEG4000, 0.1 M Sodium Citrate pH 6.0, 0.1 M Magnesium Acetate, 0.1 M Lithium Acetate
分辨率 3.45 Å R-free 0.296
7EM8 Crystal structure of the PI5P4Kbeta T201M-2a-ATP complex 提交 2021-04-13 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 31–416(386 aa)
链 B 31–416(386 aa)
突变:T201M 突变:T201M CX0 [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate × 1 CXC [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.1;293 K;9%(w/v) PEG4000, 0.1M sodium citrate pH 6.0, 0.1M magnesium acetate, 0.1M lithium acetate
分辨率 3.05 Å R-free 0.275
7N80 Crystal Structure of PI5P4KIIBeta 提交 2021-06-11 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 32–416(385 aa)
链 B 32–416(385 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;0.15 M DL-Malic acid pH 7.0, 20% (w/v) Polyethylene glycol 3350
分辨率 2.50 Å R-free 0.283
7N81 Crystal Structure of PI5P4KIIBeta complex with CC260 提交 2021-06-11 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 32–416(385 aa)
链 B 32–416(385 aa)
未记录 HKP (7R)-8-cyclopentyl-7-(cyclopentylmethyl)-2-[(3,5-dichloro-4-hydroxyphenyl)amino]-5-methyl-7,8-dihydropteridin-6(5H)-one × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;295 K;0.2 M Sodium bromide, 0.02 M Cadmium chloride, 20% (w/v) Polyethylene glycol 3350
分辨率 2.70 Å R-free 0.281