Current Protein Identity:Q29122 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2BKH Myosin VI nucleotide-free (MDInsert2) crystal structure Deposited 2005-02-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–814(814 aa) Fragment:MOTOR DOMAIN-INSERT2, RESIDUES 2-816
Not recorded GOL GLYCEROL × 6 CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions 8-10% PEG 8000, 50MM MES PH 6.7, 150MM NH4.SO4, 3% ISO-PROPANOL, 3% TERT-BUTANOL
Resolution 2.40 Å R-free 0.254
2BKI Myosin VI nucleotide-free (MDinsert2-IQ) crystal structure Deposited 2005-02-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–858(858 aa) Fragment:DOMAIN LONG-S1, RESIDUES 1-858
Not recorded SO4 SULFATE ION × 1 CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions 8-10% PEG 8000, 50MM MES PH 6.7, 150MM NH4.SO4, 3% ISO-PROPANOL, 3% TERT-BUTANOL
Resolution 2.90 Å R-free 0.304
2V26 Myosin VI (MD) pre-powerstroke state (Mg.ADP.VO4) Deposited 2007-06-03 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 5–377(373 aa) Fragment:DOMAIN MOTOR, RESIDUES 5-377,379-789
Chain A 379–789(411 aa) Fragment:DOMAIN MOTOR, RESIDUES 5-377,379-789
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 1 VO4 VANADATE ION × 1 EDO 1,2-ETHANEDIOL × 7 SO4 SULFATE ION × 2 MG MAGNESIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions 3-4% PEG 8000, 50MM MES PH 6.75, 100MM SAM, 1MM TCEP
Resolution 1.75 Å R-free 0.227
2VAS Myosin VI (MD-insert2-CaM, Delta-Insert1) Post-rigor state Deposited 2007-09-04 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 2–277(276 aa) Fragment:MOTOR DOMAIN-INSERT2,RESIDUES 2-277,304-377,379-816
Chain A 304–377(74 aa) Fragment:MOTOR DOMAIN-INSERT2,RESIDUES 2-277,304-377,379-816
Chain A 379–816(438 aa) Fragment:MOTOR DOMAIN-INSERT2,RESIDUES 2-277,304-377,379-816
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 1 BEF BERYLLIUM TRIFLUORIDE ION × 1 MG MAGNESIUM ION × 1 CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions 8% PEG 8000, 50MM GLYCINE PH 9.5, 6% MPD
Resolution 2.40 Å R-free 0.256
2VB6 Myosin VI (MD-insert2-CaM, Delta Insert1) Post-rigor state (crystal form 2) Deposited 2007-09-06 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 2–277(276 aa) Fragment:MOTOR DOMAIN-INSERT2,RESIDUES 2-277,304-377,379-816
Chain A 304–377(74 aa) Fragment:MOTOR DOMAIN-INSERT2,RESIDUES 2-277,304-377,379-816
Chain A 379–816(438 aa) Fragment:MOTOR DOMAIN-INSERT2,RESIDUES 2-277,304-377,379-816
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 1 BEF BERYLLIUM TRIFLUORIDE ION × 1 MG MAGNESIUM ION × 1 CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions 10% PEG 8000, 50MM GLYCINE PH 9.5, 6% MPD
Resolution 2.30 Å R-free 0.253
2X51 M6 delta Insert1 Deposited 2010-02-04 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–277(277 aa) Fragment:MYOSIN VI DELTA INSERT1,RESIDUES 1-277,303-817
Chain A 304–816(513 aa) Fragment:MYOSIN VI DELTA INSERT1,RESIDUES 1-277,303-817
Not recorded GOL GLYCEROL × 7 SO4 SULFATE ION × 1 CA CALCIUM ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6.75;10.8% PEG 8000, 50 MM MES PH 6.75, 175 MM AMMONIUM SULFATE, 3% ISO-PROPANOL, 3% TERT-BUTANOL, 4 MM EGTA. SOLUTION OF PROTEIN AT 18 MG/ML.
Resolution 2.20 Å R-free 0.272
3GN4 Myosin lever arm Deposited 2009-03-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 771–918(148 aa) Fragment:sequence database residues 771-918
Not recorded CA CALCIUM ION × 4 MG MAGNESIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8.5;277 K;16 % PEG 2K, 100 mM MgCl2, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.70 Å R-free 0.264
3GN4 Myosin lever arm Deposited 2009-03-16 Assembly 2 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain E 771–918(148 aa) Fragment:sequence database residues 771-918
Not recorded CA CALCIUM ION × 4 MG MAGNESIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8.5;277 K;16 % PEG 2K, 100 mM MgCl2, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.70 Å R-free 0.264
3L9I Myosin VI nucleotide-free (mdinsert2) L310G mutant crystal structure Deposited 2010-01-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 2–816(815 aa) Fragment:MOTOR DOMAIN-INSERT2, RESIDUES 2-816
Mutation:L310G TBU TERTIARY-BUTYL ALCOHOL × 1 ACT ACETATE ION × 2 PO4 PHOSPHATE ION × 4 CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 9;277 K;4% PEG 8000, 50mM Glycine pH9, 3% iso-propanol, 3% tert-butanol, 1mM TCEP , VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.20 Å R-free 0.235
4ANJ MYOSIN VI (MDinsert2-GFP fusion) PRE-POWERSTROKE STATE (MG.ADP.AlF4) Deposited 2012-03-19 Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 1–817(817 aa) Fragment:MYOSIN-6 RESIDUES 1-817, GFP RESIDUES 2-238
Non-standard monomer:Yes (specific site not provided by mmCIF) ADP ADENOSINE-5'-DIPHOSPHATE × 1 MG MAGNESIUM ION × 1 ALF TETRAFLUOROALUMINATE ION × 1 CA CALCIUM ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions 5% PEG 8000, 50 MM MES PH 5.5, 100 MM NH4SO4, 20 MM MGCL2, 20 MM NACL AND 3 % PROPAN-2-OL
Resolution 2.60 Å R-free 0.288