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Protein Structures and Oligomeric States

Enter a protein name, UniProt accession or PDB ID. Name searches ask you to confirm the protein identity before related structures are queried.

Current Protein Identity：Q46604 New Search
13PDB entries
15Biological assembly
28chain/assembly records
Main Difference Dimensions in This Set
Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1AXJ FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES Deposited 1997-10-16 Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count
Chain A 1–122（122 aa）
Not recorded FMN FLAVIN MONONUCLEOTIDE × 1 SOLUTION NMR
NMR measurement conditions pH 6.8；309 K
Resolution not provided
1FLM DIMER OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F) Deposited 1999-03-10 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Not recorded FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions pH 7.5；20% PEG6000, 0.1M TRIS(PH7.5), 20% GRYCEROL, 0.2M NACL
Resolution 1.30 Å R-free 0.182
1WLI L122Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2004-06-28 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：L122Y Mutation：L122Y FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；298 K；PEG6000, sodium acetate, Tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.60 Å R-free 0.185
1WLK L122E mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2004-06-28 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：L122E Mutation：L122E FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；298 K；PEG6000, sodium acetate, Tris , pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.90 Å R-free 0.212
1WLK L122E mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2004-06-28 Assembly 2 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain C 1–122（122 aa）
Chain D 1–122（122 aa）
Mutation：L122E Mutation：L122E FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；298 K；PEG6000, sodium acetate, Tris , pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.90 Å R-free 0.212
2E83 T31V mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2007-01-17 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：T31V Mutation：T31V FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；pH 7.5；298 K；PEG 6000, sodium acetate, Tris, pH 7.5, VAPOR DIFFUSION, temperature 298K
Resolution 1.52 Å R-free 0.188
3A20 L122K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2009-04-27 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：L122K Mutation：L122K FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；298 K；PEG 6000, sodium acetate, Tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.60 Å R-free 0.188
3A6Q E13T mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2009-09-08 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：E13T Mutation：E13T FMN FLAVIN MONONUCLEOTIDE × 2 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；24% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 10% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.40 Å R-free 0.182
3A6R E13Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2009-09-08 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：E13Q Mutation：E13Q FMN FLAVIN MONONUCLEOTIDE × 2 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；24% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 10% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.20 Å R-free 0.189
3A6R E13Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2009-09-08 Assembly 2 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain C 1–122（122 aa）
Chain D 1–122（122 aa）
Mutation：E13Q Mutation：E13Q FMN FLAVIN MONONUCLEOTIDE × 2 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；24% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 10% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.20 Å R-free 0.189
3AMF E13R mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2010-08-19 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：E13R Mutation：E13R FMN FLAVIN MONONUCLEOTIDE × 2 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；22% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 19% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.60 Å R-free 0.224
3AWH E13K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2011-03-22 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：E13K Mutation：E13K FMN FLAVIN MONONUCLEOTIDE × 2 CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；24% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 19% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.60 Å R-free 0.207
3VY2 N33D mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2012-09-21 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：N33D Mutation：N33D FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；23% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 19.8% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.60 Å R-free 0.192
3VY5 N33Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2012-09-21 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Chain B 1–122（122 aa）
Mutation：N33Q Mutation：N33Q FMN FLAVIN MONONUCLEOTIDE × 2 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；20% PEG 6000, 0.1M Tris, 0.2M sodium acetate, 16.8% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Resolution 1.40 Å R-free 0.184
3VYA W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) Deposited 2012-09-22 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1–122（122 aa）
Mutation：W32Y FMN FLAVIN MONONUCLEOTIDE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8.05；293 K；100mM HEPES, 85%(v/v) 2-Methyl-2,4-pentanediol, 50%(w/v) polyethylene glycol 400, pH 8.05, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 2.40 Å R-free 0.273

This page presents structural evidence recorded in PDB/mmCIF.“No recorded non-water small molecule” does not prove that the experimental sample was ligand-free; experimental conditions belong to the PDB experiment, while ligands and copy counts are shown for each biological assembly.