当前蛋白身份:Q6PJA4 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1IT9 CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A 提交 2002-01-11 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 H 44–238(195 aa) 片段:FAB FRAGMENT
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;296 K;PEG4000, SODIUM ACETATE, METHANOL, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 296K
分辨率 2.80 Å R-free 0.280
2FL5 Cofactor-containing antibodies: Crystal structure of the original yellow antibody 提交 2006-01-05 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 H 20–240(221 aa)
未记录 RBF RIBOFLAVIN × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;298 K;PEG 4000, di-ammonium hydrogen citrate, tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
分辨率 3.00 Å R-free 0.290
2FL5 Cofactor-containing antibodies: Crystal structure of the original yellow antibody 提交 2006-01-05 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 20–240(221 aa)
未记录 RBF RIBOFLAVIN × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;298 K;PEG 4000, di-ammonium hydrogen citrate, tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
分辨率 3.00 Å R-free 0.290
2FL5 Cofactor-containing antibodies: Crystal structure of the original yellow antibody 提交 2006-01-05 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 20–240(221 aa)
未记录 RBF RIBOFLAVIN × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;298 K;PEG 4000, di-ammonium hydrogen citrate, tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
分辨率 3.00 Å R-free 0.290
2FL5 Cofactor-containing antibodies: Crystal structure of the original yellow antibody 提交 2006-01-05 Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 F 20–240(221 aa)
未记录 RBF RIBOFLAVIN × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;298 K;PEG 4000, di-ammonium hydrogen citrate, tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50
分辨率 3.00 Å R-free 0.290
2NXZ HIV-1 gp120 Envelope Glycoprotein (T257S, S334A, S375W) Complexed with CD4 and Antibody 17b 提交 2006-11-20 Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 D 20–241(222 aa) 片段:ANTIGEN-BINDING FRAGMENT, FAB
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 13 EDO 1,2-ETHANEDIOL × 3 HEZ HEXANE-1,6-DIOL × 1 IPA ISOPROPYL ALCOHOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.6;298 K;7.5% PEG 4000, 8.5% MPD, 100 mM Na Citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 2.04 Å R-free 0.244
2NY0 HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, T257S, V275C, S334A, S375W, A433M) Complexed with CD4 and Antibody 17b 提交 2006-11-20 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 D 20–241(222 aa) 片段:ANTIGEN-BINDING FRAGMENT, FAB
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 12 HEZ HEXANE-1,6-DIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.6;298 K;7.5% PEG 8000, 7.5% MPD, 100 mM Na Citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 2.20 Å R-free 0.242
2NY2 HIV-1 gp120 Envelope Glycoprotein (T123C, T257S, S334A, S375W, G431C) Complexed with CD4 and Antibody 17b 提交 2006-11-20 Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 D 20–241(222 aa) 片段:ANTIGEN-BINDING FRAGMENT, FAB
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 11 EDO 1,2-ETHANEDIOL × 2 HEZ HEXANE-1,6-DIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.6;298 K;7.2% PEG 8000, 7.8% MPD, 100 mM Na Citrate , pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 2.00 Å R-free 0.223
2NY4 HIV-1 gp120 Envelope Glycoprotein (K231C, T257S, E268C, S334A, S375W) Complexed with CD4 and Antibody 17b 提交 2006-11-20 Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 D 20–241(222 aa) 片段:ANTIGEN-BINDING FRAGMENT, FAB
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 13 HEZ HEXANE-1,6-DIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.6;298 K;7.0% PEG 8000, 8.0% MPD, 100 mM Na Citrate , pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 2.00 Å R-free 0.241
2NY5 HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, I109C, T257S, V275C, S334A, S375W, Q428C, A433M) Complexed with CD4 and Antibody 17b 提交 2006-11-20 Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 H 20–241(222 aa) 片段:ANTIGEN-BINDING FRAGMENT, FAB
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 9 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.6;298 K;9.2% PEG 4000, 9.5% MPD, 100 mM Na Citrate , pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 2.50 Å R-free 0.255