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Protein Structures and Oligomeric States

Enter a protein name, UniProt accession or PDB ID. Name searches ask you to confirm the protein identity before related structures are queried.

Current Protein Identity：Q88793 New Search
6PDB entries
6Biological assembly
26chain/assembly records
Main Difference Dimensions in This Set
Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
9YAX Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV in complex with Fab fragment of the antibody EEEV-179 Deposited 2025-09-16 Assembly 1 Other combination Heteromer；Protein × 17 PDB declaration: 17-meric（17） Consistent with protein count
Chain P 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain Q 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain R 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain S 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain T 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.20 Å
9YAZ Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-179 at 40C sample. Deposited 2025-09-16 Assembly 1 Other combination Heteromer；Protein × 17 PDB declaration: 17-meric（17） Consistent with protein count
Chain P 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain Q 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain R 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain S 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain T 102–261（160 aa） Fragment：Capsid c-terminal domain
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.80 Å
9YB1 Localized reconstruction of the asymmetric unit of SINV/EEEV at pH 5.6. Deposited 2025-09-16 Assembly 1 Other combination Heteromer；Protein × 12 PDB declaration: 12-meric（12） Consistent with protein count
Chain P 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain Q 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain R 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain S 102–261（160 aa） Fragment：Capsid c-terminal domain
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 5.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.70 Å
9YB2 Localized reconstruction of the asymmetric unit of SINV/EEEV at 40C sample. Deposited 2025-09-16 Assembly 1 Other combination Heteromer；Protein × 12 PDB declaration: 12-meric（12） Consistent with protein count
Chain P 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain Q 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain R 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain S 102–261（160 aa） Fragment：Capsid c-terminal domain
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.10 Å
9YB3 Localized reconstruction of the asymmetric unit of SINV/EEEV. Deposited 2025-09-16 Assembly 1 Other combination Heteromer；Protein × 12 PDB declaration: 12-meric（12） Consistent with protein count
Chain P 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain Q 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain R 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Chain S 102–261（160 aa） Fragment：Capsid protein c-terminal domain
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.60 Å
9YB4 Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV. Deposited 2025-09-16 Assembly 1 Other combination Heteromer；Protein × 12 PDB declaration: 12-meric（12） Consistent with protein count
Chain P 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain Q 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain R 102–261（160 aa） Fragment：Capsid c-terminal domain
Chain S 102–261（160 aa） Fragment：Capsid c-terminal domain
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å

This page presents structural evidence recorded in PDB/mmCIF.“No recorded non-water small molecule” does not prove that the experimental sample was ligand-free; experimental conditions belong to the PDB experiment, while ligands and copy counts are shown for each biological assembly.