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{
"code": "SASDAG5",
"status": "Published",
"type_of_curve": "Merged",
"angular_unit": "1/nm",
"project": {
"title": "Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq.",
"publication": {
"title": "Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq.",
"author_list": "Beich-Frandsen M, Vecerek B, Konarev PV, Sjöblom B, Kloiber K, Hämmerle H, Rajkowitsch L, Miles AJ, Kontaxis G, Wallace BA, Svergun DI, Konrat R, Bläsi U, Djinovic-Carugo K",
"journal": "Nucleic Acids Res",
"doi": "10.1093/nar/gkq1346",
"pmid": "21330354",
"published_date": "2011 Jun"
},
"status": "released",
"submitted_date": null,
"released_date": "2015-07-07"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDAG5.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDAG5.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAG5_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAG5_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDAG5_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAG5_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAG5.sascif",
"experiment": {
"instrument": {
"detector": {
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"name": "MAR 345 Image Plate",
"resolution": null
},
"name": "DORIS III, DESY",
"city": "Hamburg",
"country": "Germany",
"beamline_name": "EMBL X33",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
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"line_collimation_integrationwidth": null,
"xray_energy": null,
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"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "RNA chaperone Hfq",
"short_name": "Hfq",
"sequence": "MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTS\r\nSNYHHGSSAQNTSAQQDSEETE",
"organism": "Escherichia coli",
"uniprot_code": null,
"uniprot_range_first": null,
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"oligomerization": "hexamer",
"molecular_type": "protein",
"uniprot_sequence": null,
"mw": 11.2,
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"number_molecules": 6,
"complex_state": null,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": null
}
],
"buffer": {
"name": "50 mM Tris-HCL 150 mM NaCl 1.0 mM DTT",
"concentration_unit": null,
"comment": null,
"additive": "150 mM NaCl, 1.0 mM DTT",
"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "RNA shaperone Hfq",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "EMBL-Hamburg",
"address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
"full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
"webpage": "http://www.embl-hamburg.de/index.php"
}
],
"contributor_name": "Petr",
"contributor_surname": "Konarev",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2008-05-02",
"storage_temperature": 37.0,
"cell_temperature": 37.0,
"exposure_time": 120.0,
"number_of_frames": 2,
"wavelength": null,
"sample_detector_distance": null,
"concentration_min": 2.3,
"concentration_max": 18.5,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.155,
"s_max": 5.171,
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"seccolumn": null
},
"fits": [
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"bead_radius": 1.9,
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"comment": "",
"user": 88
}
],
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"fit_residual_plot": "SASDAG5_fit1_fitresiduals_img.png",
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},
{
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"software": "BUNCH",
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}
],
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}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": "GNOM",
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [
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],
"intensity_unit": null,
"experimental_mw": 67.2,
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"guinier_i0_mw": null,
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"porod_mw": null,
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"pddf_i0": 133.0,
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"guinier_i0": 130.0,
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"pddf_rg": 3.23,
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"guinier_rg": 3.2,
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"pddf_dmax": 11.2,
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"porod_volume": 110.0,
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"estimated_volume": null,
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"guinier_point_first": null,
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"pddf_point_first": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDAG5_datloglog_img.png",
"symmetry": null,
"last_modified": "2023-05-25T11:22:16.556436+02:00",
"bragg_peak": []
}
