SASDDH2

Aglycosylated Human Immunoglobulin G Fc Region

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2019-12-06T13:07:15.624532+01:00
▼

1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Aglycosylated Human Immunoglobulin G Fc Region

浓度— – 3.19 缓冲液 / pH20 mM Citrate-Phosphate / 7.0
实验温度25.0 设备 / 束线Photon Factory (PF), High Energy Accelerator Research Organization (KEK) / BL-10C
波长0.12 nm曝光2.0 s × 15

分子组分

组分类型 / 物种UniProt 与构建体寡聚状态分子量
Aglycosylated human immunoglobulin G Fc region
查看序列
ADKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
proteinHomo sapiensP01857104–330dimer分子数 225.651 kDa

实验曲线

曲线点数 / 列q 范围误差质量负强度点来源文件
1500[3]0.00557971–0.349685907 1/A含误差列缺失 00sasbdb/entries/h2/sasddh2/source/SASDDH2.dat
▼

2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)9.8—Å
i0Guinier0.0360.01/cm
i0P(r)1849.0—1/cm
mwExperimental51.297—kDa
mwGuinier I(0)50.6—kDa
porod_volumePorod60.0—ų
rgGuinier2.870.2Å
rgP(r)2.85—Å

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

▼

3. 来源拟合与模型 Source Fits & Models

▶

4. 来源文件索引 Source Files

▶

5. 实验说明与论文 Experiment & Publication

▼

6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20 mM Citrate-Phosphate缓冲液浓度—
pH7.0添加剂—
缓冲液说明—
纯度测定方法—消光系数—
吸收值—散射对比度—
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2017-03-05储存 / 测量温度— / 25.0
曝光时间2.0帧数15
波长0.12样品-探测器距离2.0
光源X-ray synchrotron探测器Pilatus3 2M
机构 / 束线Photon Factory (PF), High Energy Accelerator Research Organization (KEK) / BL-10C · Tsukuba, Japan
q 范围0.056 – 3.497样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可下载文件

类别文件状态大小校验值下载与查看
curvesasbdb/entries/h2/sasddh2/source/SASDDH2.datdownloaded182224fe322bf0dcbb7e294c10cb6541111ed09212bba975f0bbce21577124bc5d801下载查看原文件源站
full_entry_zipsasbdb/entries/h2/sasddh2/source/SASDDH2.zipdownloaded86708ce44211da1d093dfc083dd85aff8f7f26efed50ea2318f451424c00ff1acad28下载查看原文件源站
pddfsasbdb/entries/h2/sasddh2/source/SASDDH2.outdownloaded37716674f4c9a786dae3fe89290f76814e395dd6b9946521b47cb9f5c43afa93ea448下载查看原文件源站
sascifsasbdb/entries/h2/sasddh2/source/SASDDH2.sascifdownloaded4421014fa24f9728e74572021594906a2bbe7412678c074395facb4ac71086a01740e6下载查看原文件源站
summarysasbdb/entries/h2/sasddh2/source/summary.jsondownloaded7874a15668e8b2e93c2303acf95bda689a6f94f8acaea22196a766d0184cbe1966ed下载查看原文件源站
curve:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.dat",
  "role": "curve",
  "sha256": "4fe322bf0dcbb7e294c10cb6541111ed09212bba975f0bbce21577124bc5d801",
  "size": 18222,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/intensities_files/SASDDH2.dat"
}
full_entry_zip:来源记录与 ZIP 内部目录(4 项)
{
  "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.zip",
  "role": "full_entry_zip",
  "sha256": "ce44211da1d093dfc083dd85aff8f7f26efed50ea2318f451424c00ff1acad28",
  "size": 86708,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/zip_directories/SASDDH2.zip",
  "zip_member_count": 4,
  "zip_members": [
    {
      "crc32": "30c97fa1",
      "name": "SASDDH2/experimental_data/SASDDH2.dat",
      "size": 18222
    },
    {
      "crc32": "b35cbd5e",
      "name": "SASDDH2/pddf/SASDDH2.out",
      "size": 37716
    },
    {
      "crc32": "caa523b4",
      "name": "SASDDH2/SASDDH2_fit1.fit",
      "size": 20253
    },
    {
      "crc32": "abc3e278",
      "name": "SASDDH2/SASDDH2_fit1_model1.pdb",
      "size": 285515
    }
  ],
  "zip_validation": "central_directory_readable"
}
pddf:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.out",
  "role": "pddf",
  "sha256": "674f4c9a786dae3fe89290f76814e395dd6b9946521b47cb9f5c43afa93ea448",
  "size": 37716,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/p_of_R_files/SASDDH2.out"
}
sascif:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.sascif",
  "role": "sascif",
  "sha256": "4fa24f9728e74572021594906a2bbe7412678c074395facb4ac71086a01740e6",
  "size": 442101,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDDH2.sascif"
}
summary:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/summary.json",
  "sha256": "a15668e8b2e93c2303acf95bda689a6f94f8acaea22196a766d0184cbe1966ed",
  "size": 7874,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDDH2/"
}

全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:159 个字段值
字段路径原始值
codeSASDDH2
statusPublished
type_of_curveSingle concentration
angular_unit1/A
project.titleC<sub>H</sub>2 domain orientation of human immunoglobulin G in solution: Structural comparison of glycosylated and aglycosylated Fc regions using small-angle X-ray scattering.
project.publication.titleC<sub>H</sub>2 domain orientation of human immunoglobulin G in solution: Structural comparison of glycosylated and aglycosylated Fc regions using small-angle X-ray scattering.
project.publication.author_listYageta S, Imamura H, Shibuya R, Honda S
project.publication.journalMAbs
project.publication.doi10.1080/19420862.2018.1546086
project.publication.pmid30513259
project.publication.published_date2018 Dec 4
project.statusreleased
project.submitted_date2018-12-08
project.released_date2018-12-09
pddf_datahttps://www.sasbdb.org/media/p_of_R_files/SASDDH2.out
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDDH2.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDH2_dat_img.png
intensities_kratky_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDH2_kratky_img.png
pddf_plothttps://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDDH2_pofr_img.png
intensities_guinier_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDH2_guinier_img.png
sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDDH2.sascif
experiment.instrument.detector.typenull
experiment.instrument.detector.namePilatus3 2M
experiment.instrument.detector.resolution0.172
experiment.instrument.namePhoton Factory (PF), High Energy Accelerator Research Organization (KEK)
experiment.instrument.cityTsukuba
experiment.instrument.countryJapan
experiment.instrument.beamline_nameBL-10C
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameAglycosylated human immunoglobulin G Fc region
experiment.sample.molecule[0].short_nameaFc
experiment.sample.molecule[0].sequenceADKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
experiment.sample.molecule[0].organismHomo sapiens
experiment.sample.molecule[0].uniprot_codeP01857
experiment.sample.molecule[0].uniprot_range_first104
experiment.sample.molecule[0].uniprot_range_last330
experiment.sample.molecule[0].oligomerizationdimer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGG PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN STYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDE LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW QQGNVFSCSVMHEALHNHYTQKSLSLSPGK
experiment.sample.molecule[0].mw25.651
experiment.sample.molecule[0].total_mw51.302
experiment.sample.molecule[0].number_molecules2
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.buffer.name20 mM Citrate-Phosphate
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.0
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameAglycosylated Human Immunoglobulin G Fc Region
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_nameAIST
experiment.contributor[0].affiliation[0].addressTokyo, Japan
experiment.contributor[0].affiliation[0].full_nameNational Institute of Advanced Industrial Science and Technology (AIST)
experiment.contributor[0].affiliation[0].webpagehttp://www.aist.go.jp
experiment.contributor[0].contributor_nameSeiki
experiment.contributor[0].contributor_surnameYageta
experiment.contributor[0].orcid
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2017-03-05
experiment.storage_temperaturenull
experiment.cell_temperature25.0
experiment.exposure_time2.0
experiment.number_of_frames15
experiment.wavelength0.12
experiment.sample_detector_distance2.0
experiment.concentration_minnull
experiment.concentration_max3.19
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.056
experiment.s_max3.497
experiment.total_exposure_timenull
experiment.seccolumnnull
fits[0].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDDH2_fit1_model1_img.png
fits[0].models[0].softwareMODELLER
fits[0].models[0].pdb_link[0].pdb_code1hzh
fits[0].models[0].pdb_link[0].ext_code1HZH
fits[0].models[0].pdb_link[0].ext_typepdb
fits[0].models[0].pdb_link[0].difference_with_modelderived
fits[0].models[0].model_titlenull
fits[0].models[0].type_of_modelatomic
fits[0].models[0].software_versionnull
fits[0].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDDH2_fit1_model1.pdb
fits[0].models[0].model_mw51.24
fits[0].models[0].bead_radiusnull
fits[0].models[0].lognull
fits[0].models[0].symmetrynull
fits[0].models[0].commentnull
fits[0].models[0].user270
fits[0].fit_unit1/A
fits[0].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDDH2_fit1_fit_img.png
fits[0].softwareCRYSOL
fits[0].chi_square_value0.026
fits[0].p_value0.010176
fits[0].fit_residual_plotSASDDH2_fit1_fitresiduals_img.png
fits[0].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDDH2_fit1.fit
fits[0].fit_lognull
fits[0].software_versionnull
fits[0].description
estimated_volume_methodnull
pddf_softwareATSAS GNOM
pddf_software_version5.0
i0_calibration_standardnull
descriptionnull
experiment_descriptionSynchrotron SAXS data from solutions of aglycosylated Human Immunoglobulin G (Fc Region) in 20 mM Citrate-Phosphate, pH 7 were collected on the BL-10C beam line at the Photon Factory (PF), High Energy Accelerator Research Organization (KEK) storage ring (Tsukuba, Japan) using a Pilatus3 2M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.12 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 3.19 mg/ml was measured at 25°C. 15 successive 2 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.
tags[]
intensity_unit1/cm
experimental_mw51.297
experimental_mw_errornull
guinier_i0_mw50.6
guinier_i0_mw_errornull
porod_mwnull
porod_mw_errornull
pddf_i01849.0
pddf_i0_errornull
guinier_i00.036
guinier_i0_error0.0
pddf_rg2.85
pddf_rg_errornull
guinier_rg2.87
guinier_rg_error0.2
pddf_dmax9.8
pddf_dmax_errornull
porod_volume60.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first39
guinier_point_last253
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDDH2_datloglog_img.png
symmetrynull
last_modified2019-12-06T13:07:15.624532+01:00
bragg_peak[]
manifest.json:36 个字段值
字段路径原始值
codeSASDDH2
statussuccess
started_at2026-08-11T16:03:24.824736+00:00
finished_at2026-08-11T16:03:36.968062+00:00
source_last_modified2019-12-06T13:07:15.624532+01:00
files[0].statusdownloaded
files[0].urlhttps://www.sasbdb.org/rest-api/entry/summary/SASDDH2/
files[0].path/data/saxsdb/sasbdb/entries/h2/sasddh2/source/summary.json
files[0].size7874
files[0].sha256a15668e8b2e93c2303acf95bda689a6f94f8acaea22196a766d0184cbe1966ed
files[1].statusdownloaded
files[1].urlhttps://www.sasbdb.org/media/intensities_files/SASDDH2.dat
files[1].path/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.dat
files[1].size18222
files[1].sha2564fe322bf0dcbb7e294c10cb6541111ed09212bba975f0bbce21577124bc5d801
files[1].rolecurve
files[2].statusdownloaded
files[2].urlhttps://www.sasbdb.org/media/p_of_R_files/SASDDH2.out
files[2].path/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.out
files[2].size37716
files[2].sha256674f4c9a786dae3fe89290f76814e395dd6b9946521b47cb9f5c43afa93ea448
files[2].rolepddf
files[3].statusdownloaded
files[3].urlhttps://www.sasbdb.org/media/sascif/sascif_files/SASDDH2.sascif
files[3].path/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.sascif
files[3].size442101
files[3].sha2564fa24f9728e74572021594906a2bbe7412678c074395facb4ac71086a01740e6
files[3].rolesascif
files[4].statusdownloaded
files[4].urlhttps://www.sasbdb.org/media/zip_directories/SASDDH2.zip
files[4].path/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.zip
files[4].size86708
files[4].sha256ce44211da1d093dfc083dd85aff8f7f26efed50ea2318f451424c00ff1acad28
files[4].rolefull_entry_zip
files[4].zip_member_count4
files[4].zip_validationcentral_directory_readable
查看完整 summary.json 原文
{
  "code": "SASDDH2",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/A",
  "project": {
    "title": "C<sub>H</sub>2 domain orientation of human immunoglobulin G in solution: Structural comparison of glycosylated and aglycosylated Fc regions using small-angle X-ray scattering.",
    "publication": {
      "title": "C<sub>H</sub>2 domain orientation of human immunoglobulin G in solution: Structural comparison of glycosylated and aglycosylated Fc regions using small-angle X-ray scattering.",
      "author_list": "Yageta S, Imamura H, Shibuya R, Honda S",
      "journal": "MAbs",
      "doi": "10.1080/19420862.2018.1546086",
      "pmid": "30513259",
      "published_date": "2018 Dec 4"
    },
    "status": "released",
    "submitted_date": "2018-12-08",
    "released_date": "2018-12-09"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDDH2.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDDH2.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDH2_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDH2_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDDH2_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDH2_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDDH2.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus3 2M",
        "resolution": 0.172
      },
      "name": "Photon Factory (PF), High Energy Accelerator Research Organization (KEK)",
      "city": "Tsukuba",
      "country": "Japan",
      "beamline_name": "BL-10C",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "Aglycosylated human immunoglobulin G Fc region",
          "short_name": "aFc",
          "sequence": "ADKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK",
          "organism": "Homo sapiens",
          "uniprot_code": "P01857",
          "uniprot_range_first": 104,
          "uniprot_range_last": 330,
          "oligomerization": "dimer",
          "molecular_type": "protein",
          "uniprot_sequence": "ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS\nGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGG\nPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN\nSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDE\nLTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW\nQQGNVFSCSVMHEALHNHYTQKSLSLSPGK",
          "mw": 25.651,
          "total_mw": 51.302,
          "number_molecules": 2,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "20 mM Citrate-Phosphate",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 7.0,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Aglycosylated Human Immunoglobulin G Fc Region",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": "AIST",
            "address": "Tokyo, Japan",
            "full_name": "National Institute of Advanced Industrial Science and Technology (AIST)",
            "webpage": "http://www.aist.go.jp"
          }
        ],
        "contributor_name": "Seiki",
        "contributor_surname": "Yageta",
        "orcid": ""
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2017-03-05",
    "storage_temperature": null,
    "cell_temperature": 25.0,
    "exposure_time": 2.0,
    "number_of_frames": 15,
    "wavelength": 0.12,
    "sample_detector_distance": 2.0,
    "concentration_min": null,
    "concentration_max": 3.19,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.056,
    "s_max": 3.497,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDDH2_fit1_model1_img.png",
          "software": "MODELLER",
          "pdb_link": [
            {
              "pdb_code": "1hzh",
              "ext_code": "1HZH",
              "ext_type": "pdb",
              "difference_with_model": "derived"
            }
          ],
          "model_title": null,
          "type_of_model": "atomic",
          "software_version": null,
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDDH2_fit1_model1.pdb",
          "model_mw": 51.24,
          "bead_radius": null,
          "log": null,
          "symmetry": null,
          "comment": null,
          "user": 270
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDDH2_fit1_fit_img.png",
      "software": "CRYSOL",
      "chi_square_value": 0.026,
      "p_value": 0.010176,
      "fit_residual_plot": "SASDDH2_fit1_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDDH2_fit1.fit",
      "fit_log": null,
      "software_version": null,
      "description": ""
    }
  ],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": "5.0",
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": "Synchrotron SAXS data from solutions of aglycosylated Human Immunoglobulin G (Fc Region) in 20 mM Citrate-Phosphate, pH 7 were collected on the BL-10C beam line at the Photon Factory (PF), High Energy Accelerator Research Organization (KEK) storage ring (Tsukuba, Japan) using a Pilatus3 2M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.12 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 3.19 mg/ml was measured at 25°C. 15 successive 2 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.",
  "tags": [],
  "intensity_unit": "1/cm",
  "experimental_mw": 51.297,
  "experimental_mw_error": null,
  "guinier_i0_mw": 50.6,
  "guinier_i0_mw_error": null,
  "porod_mw": null,
  "porod_mw_error": null,
  "pddf_i0": 1849.0,
  "pddf_i0_error": null,
  "guinier_i0": 0.036,
  "guinier_i0_error": 0.0,
  "pddf_rg": 2.85,
  "pddf_rg_error": null,
  "guinier_rg": 2.87,
  "guinier_rg_error": 0.2,
  "pddf_dmax": 9.8,
  "pddf_dmax_error": null,
  "porod_volume": 60.0,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 39,
  "guinier_point_last": 253,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDDH2_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2019-12-06T13:07:15.624532+01:00",
  "bragg_peak": []
}
查看完整 manifest.json 原文
{
  "code": "SASDDH2",
  "status": "success",
  "started_at": "2026-08-11T16:03:24.824736+00:00",
  "finished_at": "2026-08-11T16:03:36.968062+00:00",
  "source_last_modified": "2019-12-06T13:07:15.624532+01:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDDH2/",
      "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/summary.json",
      "size": 7874,
      "sha256": "a15668e8b2e93c2303acf95bda689a6f94f8acaea22196a766d0184cbe1966ed"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDDH2.dat",
      "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.dat",
      "size": 18222,
      "sha256": "4fe322bf0dcbb7e294c10cb6541111ed09212bba975f0bbce21577124bc5d801",
      "role": "curve"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/p_of_R_files/SASDDH2.out",
      "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.out",
      "size": 37716,
      "sha256": "674f4c9a786dae3fe89290f76814e395dd6b9946521b47cb9f5c43afa93ea448",
      "role": "pddf"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDDH2.sascif",
      "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.sascif",
      "size": 442101,
      "sha256": "4fa24f9728e74572021594906a2bbe7412678c074395facb4ac71086a01740e6",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDDH2.zip",
      "path": "/data/saxsdb/sasbdb/entries/h2/sasddh2/source/SASDDH2.zip",
      "size": 86708,
      "sha256": "ce44211da1d093dfc083dd85aff8f7f26efed50ea2318f451424c00ff1acad28",
      "role": "full_entry_zip",
      "zip_member_count": 4,
      "zip_validation": "central_directory_readable"
    }
  ]
}