查看完整 summary.json 原文
{
"code": "SASDFR7",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "Rabbit muscle fructose-1,6-bisphosphate aldolase K229M mutant",
"publication": null,
"status": "released",
"submitted_date": "2019-06-21",
"released_date": "2021-02-15"
},
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},
"name": "Département de Biochimie, Université de Montréal",
"city": "Montréal",
"country": "Canada",
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"type_of_source": "X-ray in house",
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},
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"molecule": [
{
"long_name": "Fructose-bisphosphate aldolase A",
"short_name": "Aldolase",
"sequence": ">FBP aldolase\r\nPHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFH\r\nETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSA\r\nLAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLMPNMVTPGHACT\r\nQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENL\r\nKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY",
"organism": "Oryctolagus cuniculus",
"uniprot_code": "P00883",
"uniprot_range_first": 2,
"uniprot_range_last": 364,
"oligomerization": "tetramer",
"molecular_type": "protein",
"uniprot_sequence": "MPHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYR\nQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTN\nGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQ\nNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHAC\nTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTF\nSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFIS\nNHAY",
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"number_molecules": 4,
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"deuteration": null,
"molecule_source": "biological",
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}
],
"buffer": {
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"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.0,
"deuteration": null
},
"purity_method": null,
"name": "Rabbit muscle fructose-bisphosphate aldolase A, K229M mutant",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Montréal, Canada",
"full_name": "Département de biochimie, Université de Montréal",
"webpage": "http://www.umontreal.ca/"
}
],
"contributor_name": "Normand",
"contributor_surname": "Cyr",
"orcid": "https://orcid.org/0000-0002-9024-525X"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2019-06-14",
"storage_temperature": 4.0,
"cell_temperature": 20.0,
"exposure_time": 60.0,
"number_of_frames": 10,
"wavelength": 1.348,
"sample_detector_distance": 600.0,
"concentration_min": null,
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"s_min": 0.107,
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},
"fits": [
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"software": "PDB (Protein Data Bank)",
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"pdb_code": "5f4x",
"ext_code": "5F4X",
"ext_type": "pdb",
"difference_with_model": "identical"
}
],
"model_title": null,
"type_of_model": "atomic",
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"bead_radius": null,
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"symmetry": "P222",
"comment": null,
"user": 462
}
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"software": "CRYSOL",
"chi_square_value": 1.659,
"p_value": 2.1e-05,
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"comment": null,
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}
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"software": "DAMMIN",
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"pddf_software": "ATSAS GNOM",
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"description": null,
"experiment_description": "SAXS data from solutions of rabbit muscle fructose-bisphosphate aldolase A (K229M) in 20 mM HEPES, pH 7 were collected using Xenocs BioXolver L instrument with MetalJet (Département de Biochimie, Université de Montréal, Canada) with a Pilatus3 R 300K detector at a wavelength of λ = 1.348 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 8.66 mg/ml was measured at 20°C. 10 successive 60 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.",
"tags": [],
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"experimental_mw": 157.3,
"experimental_mw_error": null,
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"porod_mw": 133.0,
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"porod_volume": 213.0,
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"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 1,
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"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDFR7_datloglog_img.png",
"symmetry": null,
"last_modified": "2022-08-22T09:53:00.976207+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
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"finished_at": "2026-08-11T15:37:21.699315+00:00",
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