查看完整 summary.json 原文
{
"code": "SASDXB9",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "A fold switch regulates conformation of an alphavirus RNA-dependent RNA polymerase.",
"publication": {
"title": "A fold switch regulates conformation of an alphavirus RNA-dependent RNA polymerase.",
"author_list": "Arnold JJ, Braet SM, Vieira LC, Moustafa IM, Gohara DW, Fecko JA, Su YN, Jain A, Aponte-Diaz D, Wilke CO, Anand GS, Yennawar NH, Cameron CE",
"journal": "Nucleic Acids Res",
"doi": "10.1093/nar/gkag029",
"pmid": "41556341",
"published_date": "2026 Jan 14"
},
"status": "released",
"submitted_date": "2025-09-18",
"released_date": "2026-01-23"
},
"pddf_data": null,
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDXB9.dat",
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"experiment": {
"instrument": {
"detector": {
"type": "Hybrid Photon Counting (HPC) X-ray detector",
"name": "Rigaku HyPix-3000",
"resolution": 100.0
},
"name": "Pennsylvania State University",
"city": "University Park, PA",
"country": "USA",
"beamline_name": "Rigaku BioSAXS-2000",
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"type_of_source": "X-ray in house",
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"line_collimation_integrationwidth": null,
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},
"sample": {
"molecule": [
{
"long_name": "RNA-directed RNA polymerase nsP4",
"short_name": "RdRp nsP4",
"sequence": "YIFSSDTGQGHLQQKSVRQTTLPVNIVEEVHEEKCYPPKLDEIKEQLLLKRLQESASTAN\r\nRSRYQSRKVENMKAMIIHRLKEGCRLYLASDTPRVPSYRITYPAPIYSPSINIKLSNPET\r\nAVAVCNEFLARNYPTVASYQVTDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHA\r\nPTIRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTMDSAAFNVECFKKYACNQEYWRE\r\nFASSPIRVTTENLTTYVTKLKGPKAAALFAKTHNLLPLQEVPMDRFTMDMKRDVKVTPGT\r\nKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLNAVLLPNVHTLFDMSAEDFDAIIATH\r\nFKPGDAVLETDIASFDKSQDDSLALTAMMLLEDLGVDQPILDLIEAAFGEISSCHLPTGT\r\nRFKFGAMMKSGMFLTLFVNTLLNITIASRVLEERLTTSACAAFIGDDNIIHGVVSDALMA\r\nARCATWMNMEVKIIDAVVSVKAPYFCGGFILHDTVTGTACRVADPLKRLFKLGKPLAAGD\r\nEQDEDRRRALADEVTRWQRTGLVTELERAVYSRYEVQGITAVITSMATFASSKENFKKLR\r\nGPVVTLYGGPK",
"organism": "O'nyong-nyong virus",
"uniprot_code": "O90368",
"uniprot_range_first": 1903,
"uniprot_range_last": 2513,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MDSVYVDIDADSAFLKALQRAYPMFEVEPKQVTPNDHANARAFSHLAIKLIEQEIDPDST\nILDIGPAPARRMMSDRKYHCVCPMRSAEDPERLANYARKLASAAGKVTDKNISGKINDLQ\nAVMAVPNMETSTFCLHTDATCKQRGDVAIYQDVYAVHAPTSLYHQAIKGVRVAYWIGFDT\nTPFMYNAMAGAYPSYSTNWADEQVLKAKNIGLCSTDLSEGRRGKLSIMRGKKLKPCDRVL\nFSVGSTLYPESRKLLQSWHLPSVFHLKGKLSFTCRCDTIVSCEGYVVKRVTMSPGIYGKT\nSGYAVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLV\nGLNQRIVVNGRTQRNTNTMKNYLLPIVAQAFSKWAKECRKDMEDEKLLGVRERTLTCCCL\nWAFRKHKTHTVYKRPDTQSIQKVPAEFDSFVIPSLWSSGLSIPLRTRIKWLLSKAPKHEQ\nLPHSGNAEEAAQAEMDAAEEREAELTREAMPPLQATQDDVQVEIDVEQLEDRAGAGIVET\nPRGAIKVTAQPSDRVVGEYLVLTPQAVLRSQKLSLIHALAEQVKTCTHSGRAGRYAVEAY\nDGRVLVPSGYAIPQEDFQSLSESATMVFNEREFVNRKLHHIAMHGPALNTDEESYELVRV\nEKTEHEYVYDVDQKKCCKREEATGLVLVGDLTSPPYHEFAYEGLKIRPACPYKTAVIGVF\nGVPGSGKSAIIKNLVTRQDLVTSGKKENCQEISNDVMRQRKLEISARTVDSLLLNGCNKP\nVEVLYVDEAFACHSGTLLALIAMVRPRQKVVLCGDPKQCGFFNMMQMKVNYNHNICTQVY\nHKSISRRCTLPVTAIVSSLHYESKMRTTNEYNQPIVVDTTGITKPEPGDLVLTCFRGWVK\nQLQIDYRGNEVMTAAASQGLTRKGVYAVRQKVNENPLYASTSEHVNVLLTRTEGKLIWKT\nLSGDPWIKILQNPPKGNFKATIKEWEAEHASIMAGICNHQMAFDTFQNKANVCWAKCLVP\nILDTAGIKLSDRQWSQIVQAFKEDRAYSPEVALNEICTRIYGVDLDSGLFSKPLISVYYA\nDNHWDNRPGGKMFGFNPEVALMLEKKYPFTKGKWNINKQICITTRKVDEFNPETNIIPAN\nRRLPHSLVAEHHTVRGERMEWLVNKINGHHMLLVSGYNLILPTKRVTWVAPLGTRGADYT\nYNLELGLPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR\nAYGYADRTSERVISVLGRKFRSSRALKPQCITSNTEMFFLFSRFDNGRRNFTTHVMNNQL\nNAVYAGLATRAGCAPSYRVKRMDIAKNTEECVVNAANPRGVPGDGVCKAVYRKWPESFRN\nSATPVGTAKTIMCGQYPVIHAVGPNFSNYSEAEGDRELASVYREVAKEVSRLGVSSVAIP\nLLSTGVYSGGKDRLLQSLNHLFTAMDSTDADVVIYCRDKEWEKKITEAISLRSQVELLDD\nHISVDCDIVRVHPDSSLAGRKGYSTVEGALYSYLEGTRFHQTAVDMAEIYTMWPKQTEAN\nEQVCLYALGESIESVRQKCPVDDADASFPPKTVPCLCRYAMTPERVARLRMNHTTSIIVC\nSSFPLPKYKIEGVQKVKCSKALLFDHNVPSRVSPRTYRPADEIIQTPQIPTEACQDAQFV\nQSITDEAVPVPSDLEACDATMDWPSIDIVPTRQRSDSFDSEYSSRSNIQLVTADVHAPMY\nANSLASSGGSVLSLSSEQAQNGIMILPDSEDTDSISRVSTPIAPPRRRLGRTINVTCDER\nEGKILPMASDRLFTAKPYTVALGVSTADITAYPIQAPLGSTQPPALEQITFGDFAEGEID\nNLLTGALTFGDFEPGEVEELTDSEWSTCSDTDEELXLDRAGGYIFSSDTGQGHLQQKSVR\nQTTLPVNIVEEVHEEKCYPPKLDEIKEQLLLKRLQESASTANRSRYQSRKVENMKATIIH\nRLKEGCRLYLASDTPRVPSYRITYPAPVYSPSISIKLNNPETAVAVCNEFLARNYPTVAS\nYQVTDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHAPTIRSAVPSPFQNTLQNV\nLAAATKRNCNVTQMRELPTMDSAVFNVECFKKYACNQEYWREFASSPIRVTTENLTMYVT\nKLKGPKAAALFAKTHNLLPLQEVPMDRFTMDMKRDVKVTPGTKHTEERPKVQVIQAAEPL\nATAYLCGIHRELVRRLNAVLLPNVHTLFDMSAEDFDAIISTHFKPGDAVLETDIASFDKS\nQDDSLALTAMMLLEDLGVDQPILDLIEAAFGEISSCHLPTGTRFKFGAMMKSGMFLTLFV\nNTLLNITIASRVLEERLTTSACAAFIGDDNIIHGVVSDALMAARCATWMNMEVKIIDAVV\nSEKAPYFCGGFILHDTVTGTSCRVADPLKRLFKLGKPLAAGDEQDEDRRRALADEVTRWQ\nRTGLITELEKAVYSRYEVQGITAVITSMATFASSKENFKKLRGPVVTLYGGPK",
"mw": 68.29,
"total_mw": 68.29,
"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "Replicates genomic and antigenomic RNA by recognizing replications specific signals. The early replication complex formed by the polyprotein P123 and nsP4 synthesizes minus-strand RNAs."
}
],
"buffer": {
"name": "25 mM HEPES, 1 mM TCEP, 5% glycerol and 500 mM NaCl.",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "O’Nyong-Nyong virus (ONNV) nsP4 full length wild type",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "PSU",
"address": "Pennsylvania, USA",
"full_name": "Pennsylvania State University (PSU)",
"webpage": "https://www.psu.edu/"
}
],
"contributor_name": "Neela",
"contributor_surname": "Yennawar",
"orcid": ""
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2023-06-08",
"storage_temperature": 4.0,
"cell_temperature": 4.0,
"exposure_time": 600.0,
"number_of_frames": 6,
"wavelength": 0.154,
"sample_detector_distance": 0.4955,
"concentration_min": null,
"concentration_max": 2.9,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.107,
"s_max": 6.135,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [],
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"pddf_software": null,
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 74.3,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": null,
"porod_mw_error": null,
"pddf_i0": null,
"pddf_i0_error": null,
"guinier_i0": 5.56155,
"guinier_i0_error": null,
"pddf_rg": null,
"pddf_rg_error": null,
"guinier_rg": 3.62,
"guinier_rg_error": 0.642,
"pddf_dmax": null,
"pddf_dmax_error": null,
"porod_volume": null,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 6,
"guinier_point_last": 32,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDXB9_datloglog_img.png",
"symmetry": null,
"last_modified": "2026-01-23T16:11:10.998145+01:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
{
"code": "SASDXB9",
"status": "success",
"started_at": "2026-08-11T16:11:00.717823+00:00",
"finished_at": "2026-08-11T16:11:06.235300+00:00",
"source_last_modified": "2026-01-23T16:11:10.998145+01:00",
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