SASDY43

Bovine serum albumin (BSA) at neutral pH

Data type: SASBDB experimental data Status: Published Curve type: SEC-SAS Last updated: 2025-12-28T19:42:12.230562+01:00

Synchrotron SAXS data from solutions of BSA in 10 mM PBS,138 mM NaCl, pH 7.25 were collected on the 4C beamline at the Pohang Accelerator Laboratory storage ring (Pohang, South Korea) using an EIGER2 X 4M detector at a sample-detector distance of 3 m and at a wavelength of λ = 0.0734 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAXS was employed. The SEC parameters were as follows: A 100.00 μl sample at 10 mg/ml was injected at a 0.1 ml/min flow rate onto a Cytiva Superdex 200 Increase 3.2/300 column at 25°C. SAXS data were collected continuously over 45 min at a flow rate of 0.1 mL/min with a 5 s integration time per frame, yielding 338 frames per run. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

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1. Samples, Components and Experimental Conditions Sample & Experiment

Sample 1 · Bovine serum albumin (BSA) at neutral pH

Concentration— – 10.0 Buffer / pH10 mM PBS, 138 mM NaCl / 7.25
Experimental temperature25.0 Facility / beamlinePohang Accelerator Laboratory / 4C
Wavelength0.0734 nmExposure5.0 s × 338

Molecular Components

ComponentType / organismUniProt and ConstructOligomeric StateMolecular weight
Bovine serum albumin
View sequence
DTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA
proteinBos taurusP0276925–607monomerMolecule count 166.5 kDa

Experimental Curves

CurvePoints / columnsq rangeUncertainty qualityNegative-intensity pointsSource file
1817[3]0.0108991–0.340093 1/AHas uncertainty columnMissing 00sasbdb/entries/43/sasdy43/source/SASDY43.dat
▼

2. Measurements Reported by SASBDB Reported Results

MetricMethodValueUncertaintyUnit
dmaxP(r)8.0—Å
i0Guinier18.6396—arbitrary
i0P(r)18.72—arbitrary
mwExperimental66.5—kDa
porod_volumePorod98.3—ų
rgGuinier2.7360.055Å
rgP(r)2.720.082Å

These values are reported by SASBDB; SAXSdb did not recalculate them from the experimental curve.

▼

3. Source Fits and Models Source Fits & Models

▶

4. Source File Index Source Files

▶

5. Experiment Description and Publication Experiment & Publication

▼

6. Complete Source Record Complete Source Record

The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.

Open the original SASBDB entry

Buffer and Sample Properties

Buffer name10 mM PBS, 138 mM NaClBuffer concentration—
pH7.25Additives—
Buffer description—
Purity measurement method—Extinction coefficient—
Absorbance—Scattering contrast—
Specific volume / dry volume— / —Mixture / deuteration— / —

Acquisition Conditions and Instrument

Measurement date2024-03-05Storage / measurement temperature4.0 / 25.0
Exposure time5.0Frames338
Wavelength0.0734Sample-to-detector distance3.0
SourceX-ray synchrotronDetectorDectris / EIGER2 X 4M
Facility / beamlinePohang Accelerator Laboratory / 4C · Pohang, South Korea
q range0.109 – 3.401Sample volume / flow rate100.0 / 0.1

Original SASBDB Plots

Experimental I(q)
Experimental I(q)
Experimental I(q), log-log
Experimental I(q), log-log
Guinier plot
Guinier plot
Kratky plot
Kratky plot
P(r) plot
P(r) plot

Downloadable Files

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All source fields (unfiltered)

Every source field is expanded here, including empty values, list members and fields already shown above.

summary.json:150 field values
Field pathRaw value
codeSASDY43
statusPublished
type_of_curveSEC-SAS
angular_unit1/A
project.titleStructural Characterization of Urea-Induced BSA Denaturation Using Size-Exclusion Chromatography Coupled with Small-Angle X-ray Scattering.
project.publication.titleStructural Characterization of Urea-Induced BSA Denaturation Using Size-Exclusion Chromatography Coupled with Small-Angle X-ray Scattering.
project.publication.author_listMaliki SK, Kim JH, Chung M, Jin KS
project.publication.journalJ Phys Chem B
project.publication.doi10.1021/acs.jpcb.5c06275
project.publication.pmid41446988
project.publication.published_date2025 Dec 25
project.statusreleased
project.submitted_date2025-12-11
project.released_date2025-12-28
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experiment.instrument.detector.resolution0.075
experiment.instrument.namePohang Accelerator Laboratory
experiment.instrument.cityPohang
experiment.instrument.countrySouth Korea
experiment.instrument.beamline_name4C
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
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experiment.instrument.xray_energynull
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experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameBovine serum albumin
experiment.sample.molecule[0].short_nameBSA
experiment.sample.molecule[0].sequenceDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASL RETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKY NGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKV HKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQE AKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEY GFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESL VNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAA DDKEACFAVEGPKLVVSTQTALA
experiment.sample.molecule[0].organismBos taurus
experiment.sample.molecule[0].uniprot_codeP02769
experiment.sample.molecule[0].uniprot_range_first25
experiment.sample.molecule[0].uniprot_range_last607
experiment.sample.molecule[0].oligomerizationmonomer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF DEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEP ERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYY ANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVA RLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKE CCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRR HPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK LGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL NRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLP DTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVV STQTALA
experiment.sample.molecule[0].mw66.5
experiment.sample.molecule[0].total_mw66.5
experiment.sample.molecule[0].number_molecules1
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_description
experiment.sample.buffer.name10 mM PBS, 138 mM NaCl
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.25
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameBovine serum albumin (BSA) at neutral pH
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[]
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2024-03-05
experiment.storage_temperature4.0
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experiment.exposure_time5.0
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experiment.wavelength0.0734
experiment.sample_detector_distance3.0
experiment.concentration_minnull
experiment.concentration_max10.0
experiment.sample_volume100.0
experiment.flow_rate0.1
experiment.s_min0.109
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experiment.total_exposure_timenull
experiment.seccolumn48
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pddf_softwareATSAS GNOM
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i0_calibration_standardnull
descriptionSynchrotron SAXS data from solutions of BSA in 10 mM PBS,138 mM NaCl, pH 7.25 were collected on the 4C beamline at the Pohang Accelerator Laboratory storage ring (Pohang, South Korea) using an EIGER2 X 4M detector at a sample-detector distance of 3 m and at a wavelength of λ = 0.0734 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAXS was employed. The SEC parameters were as follows: A 100.00 μl sample at 10 mg/ml was injected at a 0.1 ml/min flow rate onto a Cytiva Superdex 200 Increase 3.2/300 column at 25°C. SAXS data were collected continuously over 45 min at a flow rate of 0.1 mL/min with a 5 s integration time per frame, yielding 338 frames per run. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.
experiment_description-
tags[]
intensity_unitarbitrary
experimental_mw66.5
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mwnull
porod_mw_errornull
pddf_i018.72
pddf_i0_errornull
guinier_i018.6396
guinier_i0_errornull
pddf_rg2.72
pddf_rg_error0.082
guinier_rg2.736
guinier_rg_error0.055
pddf_dmax8.0
pddf_dmax_errornull
porod_volume98.3
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first30
guinier_point_last68
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDY43_datloglog_img.png
symmetrynull
last_modified2025-12-28T19:42:12.230562+01:00
bragg_peak[]
manifest.json:34 field values
Field pathRaw value
codeSASDY43
statussuccess
started_at2026-08-11T13:52:32.194960+00:00
finished_at2026-08-11T13:52:39.941071+00:00
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View the complete summary.json source
{
  "code": "SASDY43",
  "status": "Published",
  "type_of_curve": "SEC-SAS",
  "angular_unit": "1/A",
  "project": {
    "title": "Structural Characterization of Urea-Induced BSA Denaturation Using Size-Exclusion Chromatography Coupled with Small-Angle X-ray Scattering.",
    "publication": {
      "title": "Structural Characterization of Urea-Induced BSA Denaturation Using Size-Exclusion Chromatography Coupled with Small-Angle X-ray Scattering.",
      "author_list": "Maliki SK, Kim JH, Chung M, Jin KS",
      "journal": "J Phys Chem B",
      "doi": "10.1021/acs.jpcb.5c06275",
      "pmid": "41446988",
      "published_date": "2025 Dec 25"
    },
    "status": "released",
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    "released_date": "2025-12-28"
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View the complete manifest.json source
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