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{
"code": "SASDYM9",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/nm",
"project": {
"title": "Conformational dynamics of the membrane-anchored foldase LipH from Pseudomonas aeruginosa governs recognition and release of its client lipase",
"publication": {
"title": "Conformational dynamics of the membrane-anchored foldase LipH from Pseudomonas aeruginosa governs recognition and release of its client lipase",
"author_list": "Busch M, Loschwitz J, Papadopoulos A, Reiners J, Steinchen W, Calvagna V, Smits S, Jaeger K, Kedrov A",
"journal": "Journal of Biological Chemistry",
"doi": "10.1016/j.jbc.2026.113266",
"pmid": null,
"published_date": "2026 Jun"
},
"status": "released",
"submitted_date": "2026-03-08",
"released_date": "2026-06-09"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDYM9.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDYM9.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDYM9_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDYM9_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDYM9_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDYM9_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDYM9.sascif",
"experiment": {
"instrument": {
"detector": {
"type": "pixel counting",
"name": "Pilatus3 R 300K",
"resolution": 172.0
},
"name": "Center for Structural Studies, Heinrich-Heine-University",
"city": "Düsseldorf",
"country": "Germany",
"beamline_name": "Xenocs Xeuss 2.0 Q-Xoom",
"beam_geometry": null,
"type_of_source": "X-ray in house",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Lipase chaperone",
"short_name": "LipH VD",
"sequence": "MGHHHHHHHHHHSSGHIDDDDKHMWLEPSPAPETAPPASPQAGAVHAPPAASAGEAVPAPQVMPAKVAPLPTSFRGTSVDGSFSVDASGNLLITRDIRNLFDYFLSAVGEEPLQQSLDRLRAYIAAELQEPARGQALALMQQYIDYKKELVLLERDLPRLADLDALRQREAAVKALRARIFSNEAHVAFFADEETYNQFTLERLAIRQDGKLSAEEKAAAIDRLRASLPEDQQESVLPQLQSELQQQTAALQAAGAGPEAIRQMRQQLVGAEATTRLEQLDRQRSAWKGRLDDYFAEKSRIEGNTGLSEADRRAAVERLAEERFSEQERLRLGALEQMRQAEQR",
"organism": "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)",
"uniprot_code": "Q01725",
"uniprot_range_first": null,
"uniprot_range_last": null,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MKKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMP\nAKVAPLPTSFRGTSVDGSFSVDASGNLLITRDIRNLFDYFLSAVGEEPLQQSLDRLRAYI\nAAELQEPARGQALALMQQYIDYKKELVLLERDLPRLADLDALRQREAAVKALRARIFSNE\nAHVAFFADEETYNQFTLERLAIRQDGKLSAEEKAAAIDRLRASLPEDQQESVLPQLQSEL\nQQQTAALQAAGAGPEAIRQMRQQLVGAEATTRLEQLDRQRSAWKGRLDDYFAEKSRIEGN\nTGLSEADRRAAVERLAEERFSEQERLRLGALEQMRQAEQR",
"mw": 38.321,
"total_mw": 38.321,
"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "LipH without the N-terminal transmembrane helix."
}
],
"buffer": {
"name": "50 mM Tris, 100 mM NaCl, 100 µM TCEP, 5% glycerol,",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 8.0,
"deuteration": null
},
"purity_method": null,
"name": "Lipase chaperone (LipH) VD",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Düsseldorf, Germany",
"full_name": "Heinrich Heine University Düsseldorf",
"webpage": "https://www.uni-duesseldorf.de"
}
],
"contributor_name": "Jens",
"contributor_surname": "Reiners",
"orcid": ""
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2019-11-18",
"storage_temperature": 10.0,
"cell_temperature": 10.0,
"exposure_time": 600.0,
"number_of_frames": 24,
"wavelength": 0.154,
"sample_detector_distance": 0.55,
"concentration_min": null,
"concentration_max": 11.82,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.088,
"s_max": 5.321,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
"models": [
{
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"software": "EOM/RANCH",
"pdb_link": [],
"model_title": null,
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"bead_radius": 1.9,
"log": "https://www.sasbdb.org/media/log_files/logFile_001_1_mwKgT3o.log",
"symmetry": "P1",
"comment": "Volume fraction (1/8)",
"user": 402
},
{
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"comment": "Volume fraction (1/8)",
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},
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDYM9_fit1_model3_img.png",
"software": "EOM/RANCH",
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"symmetry": "P1",
"comment": "Volume fraction (1/8)",
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},
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDYM9_fit1_model4_img.png",
"software": "EOM/RANCH",
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"model_title": null,
"type_of_model": "mix",
"software_version": "RANCH version 2.1 - r(13837)",
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDYM9_fit1_model4.pdb",
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"log": "https://www.sasbdb.org/media/log_files/logFile_001_1_Or9TFWK.log",
"symmetry": "P1",
"comment": "Volume fraction (5/8)",
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}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDYM9_fit1_fixed_fit_img.png",
"software": "EOM/GAJOE",
"chi_square_value": 1.026,
"p_value": 0.5526,
"fit_residual_plot": "SASDYM9_fit1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDYM9_fit1.fit",
"fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/Size_distr_001_1_UHDluTm.txt",
"software_version": "GAJOE - version 2.1 - (r13837)",
"description": ""
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": "5.0",
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "1/cm",
"experimental_mw": 38.87,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 43.0,
"porod_mw_error": null,
"pddf_i0": 0.02556,
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"guinier_i0": 0.025214,
"guinier_i0_error": null,
"pddf_rg": 3.406,
"pddf_rg_error": null,
"guinier_rg": 3.217,
"guinier_rg_error": 0.022,
"pddf_dmax": 12.61,
"pddf_dmax_error": null,
"porod_volume": 69.97,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 1,
"guinier_point_last": 55,
"pddf_point_first": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDYM9_datloglog_img.png",
"symmetry": null,
"last_modified": "2026-06-25T14:59:42.645725+02:00",
"bragg_peak": []
}
