查看完整 summary.json 原文
{
"code": "SASDYX3",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "Modulation of Homer1 EVH1 domain internal dynamics by putative autism-associated mutations.",
"publication": {
"title": "Modulation of Homer1 EVH1 domain internal dynamics by putative autism-associated mutations.",
"author_list": "Farkas F, Maruzs B, Kálmán ZE, Klumpler T, Batta G, Péterfia B, Gáspári Z",
"journal": "FEBS Lett",
"doi": "10.1002/1873-3468.70369",
"pmid": "42206738",
"published_date": "2026 May 28"
},
"status": "released",
"submitted_date": "2025-12-10",
"released_date": "2026-06-01"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDYX3.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDYX3.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDYX3_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDYX3_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDYX3_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDYX3_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDYX3.sascif",
"experiment": {
"instrument": {
"detector": {
"type": "Hybrid Photon Counting (HPC) X-ray detector",
"name": "Rigaku HyPix-3000",
"resolution": 100.0
},
"name": "CEITEC",
"city": "Brno",
"country": "Czech Republic",
"beamline_name": "Rigaku BioSAXS-2000",
"beam_geometry": null,
"type_of_source": "X-ray in house",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Point mutant S97L of EVH1 domain of Homer protein homolog 1 from mouse monomer",
"short_name": "EVH1 Homer S97L",
"sequence": "GSHMGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLLKFAEKFQEFKEAARLAKEKSQ",
"organism": "Mus musculus",
"uniprot_code": "Q9Z2Y3",
"uniprot_range_first": 3,
"uniprot_range_last": 121,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINST\nITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEKSQEK\nMELTSTPSQESAGGDLQSPLTPESINGTDDERTPDVTQNSEPRAEPTQNALPFPHSAGDR\nTQALSHASSAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKR\nVTELECVSSQANAVHSHKTELNQTVQELEETLKVKEEEIERLKQEIDNARELQEQRDSLT\nQKLQEVEIRNKDLEGQLSDLEQRLEKSQNEQEAFRSNLKTLLEILDGKIFELTELRDNLA\nKLLECS",
"mw": 13.76,
"total_mw": 13.6,
"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "synthetic",
"molecule_description": ""
}
],
"buffer": {
"name": "20mM NaCl, 50 mM NaPi, 0.02% of sodium-azide",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.4,
"deuteration": null
},
"purity_method": null,
"name": "Point mutant S97L of EVH1 domain of Homer protein homolog 1 from mouse monomer",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "CEITEC - Central European Institute of Technology, Masaryk University",
"webpage": "https://www.ceitec.eu/"
}
],
"contributor_name": "Tomas",
"contributor_surname": "Klumpler",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2023-11-08",
"storage_temperature": 4.0,
"cell_temperature": 25.0,
"exposure_time": 600.0,
"number_of_frames": 10,
"wavelength": 0.154,
"sample_detector_distance": 0.48,
"concentration_min": null,
"concentration_max": 4.0,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.034,
"s_max": 6.442,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDYX3_fit1_model1_img.png",
"software": "GROMACS",
"pdb_link": [],
"model_title": null,
"type_of_model": "atomic",
"software_version": "2023.2",
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDYX3_fit1_model1.pdb",
"model_mw": 13.77,
"bead_radius": null,
"log": null,
"symmetry": null,
"comment": null,
"user": 195
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDYX3_fit1_fixed_fit_img.png",
"software": "Pepsi-SAXS",
"chi_square_value": 1.1003,
"p_value": 0.4393,
"fit_residual_plot": "SASDYX3_fit1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDYX3_fit1.fit",
"fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/s97l_model1_bmrb-S97L_25deg_4mg_20231108_subtr.log",
"software_version": "3.0",
"description": ""
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 11.25,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 14.28,
"porod_mw_error": null,
"pddf_i0": 0.7517,
"pddf_i0_error": null,
"guinier_i0": 0.774633,
"guinier_i0_error": null,
"pddf_rg": 1.58,
"pddf_rg_error": null,
"guinier_rg": 1.665,
"guinier_rg_error": 0.13,
"pddf_dmax": 4.25,
"pddf_dmax_error": null,
"porod_volume": 22.85,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 16,
"guinier_point_last": 91,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDYX3_datloglog_img.png",
"symmetry": null,
"last_modified": "2026-06-01T15:03:22.647475+02:00",
"bragg_peak": []
}查看完整 manifest.json 原文
{
"code": "SASDYX3",
"status": "success",
"started_at": "2026-08-11T14:10:39.277098+00:00",
"finished_at": "2026-08-11T14:10:47.199240+00:00",
"source_last_modified": "2026-06-01T15:03:22.647475+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDYX3/",
"path": "/data/saxsdb/sasbdb/entries/x3/sasdyx3/source/summary.json",
"size": 7005,
"sha256": "63b01d1ed09314290ac829d2abeb4873f3c7dd128973b259fabd98c030f0599f"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDYX3.dat",
"path": "/data/saxsdb/sasbdb/entries/x3/sasdyx3/source/SASDYX3.dat",
"size": 24640,
"sha256": "620de1452a517fa138e9f8dc07acac0e83763d24512bbe2b3e497491978ef890",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDYX3.out",
"path": "/data/saxsdb/sasbdb/entries/x3/sasdyx3/source/SASDYX3.out",
"size": 53688,
"sha256": "a9a9defdbfb28b611ed55edfb4824f853930f0602b5cb9268edd14b38c00de5f",
"role": "pddf"
},
{
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDYX3.sascif",
"path": "/data/saxsdb/sasbdb/entries/x3/sasdyx3/source/SASDYX3.sascif",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDYX3.zip",
"path": "/data/saxsdb/sasbdb/entries/x3/sasdyx3/source/SASDYX3.zip",
"size": 64077,
"sha256": "180a632e31dc9f581d535cc66d9494f47473209a4d2bc46ea2635e883bd40fe0",
"role": "full_entry_zip",
"zip_member_count": 4,
"zip_validation": "central_directory_readable"
}
]
}
