13sd
PanDDA analysis group deposition -- IDOL RING domain in complex with Z1516316257
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 13sd |
| deposition_date | 2025-10-10 |
| last_revision | 2025-12-10 |
| title | PanDDA analysis group deposition -- IDOL RING domain in complex with Z1516316257 |
| keywords | Diamond I04-1 fragment screening, PanDDA, XChemExplorer, E3, ubiquitin, Zinc finger, RING, ligase; LIGASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 21.57 Å |
| rg_electron | 20.66 Å |
| i0 | 39875900.00 |
| molecular_weight | 30463.0 kDa |
| excluded_volume | 28249 ų |
| envelope_volume | 51000 ų |
| shell_volume | 20641 ų |
| envelope_diameter | 68.5 Å |
| shell_rg | 27.01 Å |
| envelope_rg | 20.80 Å |
| shape_rg | 20.72 Å |
| total_rg | 21.21 Å |
| total_atoms | 2217 |
| n_residues | 282 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 66.2 Å |
| rg_real | 21.43 Å |
| rg_real_error | 0.40 Å |
| i0_real | 3.9880e+07 |
| i0_real_error | 4.8150e+05 |
| rg_reciprocal | 21.46 Å |
| i0_reciprocal | 39880000.0000 |
| total_estimate | 0.9117 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 28.2 Å |
| skewness | 0.111 |
| kurtosis | -0.510 |
| angular_range | — – 0.3700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2462000.0000 |
| n_real_points | 69 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.951; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.998 |