13se
PanDDA analysis group deposition -- IDOL RING domain in complex with Z1587220559
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 13se |
| deposition_date | 2025-10-10 |
| title | PanDDA analysis group deposition -- IDOL RING domain in complex with Z1587220559 |
| keywords | Diamond I04-1 fragment screening, PanDDA, XChemExplorer, E3, ubiquitin, Zinc finger, RING, ligase; LIGASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 21.55 Å |
| rg_electron | 20.63 Å |
| i0 | 22838600.00 |
| molecular_weight | 32753.0 kDa |
| excluded_volume | 39533 ų |
| envelope_volume | 50902 ų |
| shell_volume | 20620 ų |
| envelope_diameter | 68.5 Å |
| shell_rg | 27.07 Å |
| envelope_rg | 20.74 Å |
| shape_rg | 20.64 Å |
| total_rg | 21.43 Å |
| total_atoms | 2223 |
| n_residues | 282 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 66.8 Å |
| rg_real | 21.43 Å |
| rg_real_error | 0.34 Å |
| i0_real | 2.2840e+07 |
| i0_real_error | 2.7100e+05 |
| rg_reciprocal | 21.45 Å |
| i0_reciprocal | 22840000.0000 |
| total_estimate | 0.9104 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 27.5 Å |
| skewness | 0.120 |
| kurtosis | -0.494 |
| angular_range | — – 0.3700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1755000.0000 |
| n_real_points | 69 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.945; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.997 |