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1a6r

GAL6 (YEAST BLEOMYCIN HYDROLASE) MUTANT C73A

Method: X-RAY DIFFRACTION D_max: 89.5 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1a6r
deposition_date	1998-02-27
title	GAL6 (YEAST BLEOMYCIN HYDROLASE) MUTANT C73A
keywords	BLEOMYCIN HYDROLASE, PEPTIDASE, PROTEASE, DNA-BINDING PROTEIN, SELF-COMPARTMENTALIZING PROTEASE, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	25.76 Å
rg_electron	24.88 Å
i0	46183600.00
molecular_weight	53093.0 kDa
excluded_volume	66646 Å³
envelope_volume	84686 Å³
shell_volume	28420 Å³
envelope_diameter	94.3 Å
shell_rg	31.95 Å
envelope_rg	25.83 Å
shape_rg	24.86 Å
total_rg	25.75 Å
total_atoms	3733
n_residues	459
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	89.5 Å
rg_real	25.76 Å
rg_real_error	0.85 Å
i0_real	4.6180e+07
i0_real_error	6.8550e+05
rg_reciprocal	25.76 Å
i0_reciprocal	46180000.0000
total_estimate	0.8722
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	28.9 Å
skewness	0.372
kurtosis	-0.229
angular_range	— – 0.3100 Å⁻¹
current_alpha	0.0000
highest_alpha	7134000.0000
n_real_points	63
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.789; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.979; Smooth: 0.988

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	GAL6
formula_weight	54053.4 kDa
ec_number	3.4.22.-
mutation	HIS6-TEV-TAG, S2A, C73A
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	4103

MHHHHHHASENLAFQGAMASSIDISKINSWNKEFQSDLTHQLATTVLKNYNADDALLNKTRLQKQDNRVFNTVVSTDSTPVTNQKSSGRAWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDSRLVQYLLAAPTEDGGQYSMFLNLVKKYGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVTLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPKFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFTSGKEEPIVLPIWDPMGALAK

Source

organism	Saccharomyces cerevisiae
common_name	;baker's yeast ;
ncbi_taxonomy_id	4932
host_organism	Escherichia coli BL21(DE3)

Entity 2 non-polymer

description	SULFATE ION
formula_weight	96.1 kDa
src_method	syn
entity_count	6

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	370

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6. Citations (2)

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length_a	150.676 Å
length_b	150.676 Å
length_c	90.163 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	12

space_group	P 63 2 2
int_tables_number	182
crystal_system	—

resolution	2.050 Å
resolution_low	8.000 Å
r_factor	0.1930
r_work	0.1930
r_free	0.2570

fit	/app/data/saxs_computation/a6/1a6r/1a6r.fit
pddf	/app/data/pr_computation/a6/1a6r/1a6r.pr.out
profile	/app/data/saxs_computation/a6/1a6r/1a6r.dat

GAL6 (YEAST BLEOMYCIN HYDROLASE) MUTANT C73A

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction