1adx
FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURES
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1adx |
| deposition_date | 1997-02-18 |
| title | FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURES |
| keywords | BLOOD COAGULATION, ANTICOAGULANT, FIBRINOGEN, PEPTIDE SYNTHESIS, PROTEIN C, THROMBIN, DISULFIDE BONDS; BLOOD COAGULATION |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 9.57 Å |
| rg_electron | 9.48 Å |
| i0 | 72759000.00 |
| molecular_weight | 61162.0 kDa |
| excluded_volume | 72186 ų |
| envelope_volume | 13693 ų |
| shell_volume | 9806 ų |
| envelope_diameter | 41.0 Å |
| shell_rg | 17.69 Å |
| envelope_rg | 12.37 Å |
| shape_rg | 9.54 Å |
| total_rg | 9.72 Å |
| total_atoms | 7728 |
| n_residues | 560 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 38.9 Å |
| rg_real | 9.61 Å |
| rg_real_error | 0.41 Å |
| i0_real | 7.2760e+07 |
| i0_real_error | 8.7290e+05 |
| rg_reciprocal | 9.61 Å |
| i0_reciprocal | 72760000.0000 |
| total_estimate | 0.7478 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 11.3 Å |
| skewness | 0.555 |
| kurtosis | 0.318 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 125100.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.390; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.565; Smooth: 0.983 |