← Back to search

1aip

EF-TU EF-TS COMPLEX FROM THERMUS THERMOPHILUS

Method: X-RAY DIFFRACTION D_max: 197.5 Å Quality: GOOD

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	1aip
deposition_date	1997-04-22
title	EF-TU EF-TS COMPLEX FROM THERMUS THERMOPHILUS
keywords	ELONGATION FACTOR, NUCLEOTIDE EXCHANGE, GTP-BINDING, COMPLEX OF TWO ELONGATION FACTORS; COMPLEX OF TWO ELONGATION FACTORS
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	58.26 Å
rg_electron	58.72 Å
i0	901729000.00
molecular_weight	249760.0 kDa
excluded_volume	312700 Å³
envelope_volume	481880 Å³
shell_volume	73238 Å³
envelope_diameter	214.0 Å
shell_rg	54.36 Å
envelope_rg	57.28 Å
shape_rg	58.72 Å
total_rg	58.60 Å
total_atoms	17560
n_residues	2269
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	197.5 Å
rg_real	58.71 Å
rg_real_error	1.71 Å
i0_real	9.0170e+08
i0_real_error	1.8450e+07
rg_reciprocal	57.86 Å
i0_reciprocal	900500000.0000
total_estimate	0.8419
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	58.5 Å
skewness	0.502
kurtosis	-0.250
angular_range	— – 0.1350 Å⁻¹
current_alpha	0.0008
highest_alpha	39340000.0000
n_real_points	28
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.875; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.926; Smooth: 0.391

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (3)

Entity 1 polymer

description	ELONGATION FACTOR TU
formula_weight	44739.9 kDa
src_method	man
entity_count	4

Polymer

type	polypeptide(L)
strand_id	A,B,E,F
atom_count	17575

AKGEFVRTKPHVNVGTIGHVDHGKTTLTAALTYVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE

Source

organism	Thermus thermophilus
ncbi_taxonomy_id	274
host_organism	Escherichia coli

Entity 2 polymer

description	ELONGATION FACTOR TS
formula_weight	22449.1 kDa
src_method	man
entity_count	4

Polymer

type	polypeptide(L)
strand_id	C,D,G,H

MSQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA

Source

organism	Thermus thermophilus
ncbi_taxonomy_id	274
host_organism	Escherichia coli

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	15

▶

6. Citations (1)

▶

length_a	120.300 Å
length_b	127.500 Å
length_c	123.700 Å
angle_alpha	90.00 °
angle_beta	90.30 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	3.000 Å
resolution_low	100.000 Å
r_factor	0.2160
r_work	0.2160
r_free	0.2890

fit	/app/data/saxs_computation/ai/1aip/1aip.fit
pddf	/app/data/pr_computation/ai/1aip/1aip.pr.out
profile	/app/data/saxs_computation/ai/1aip/1aip.dat

EF-TU EF-TS COMPLEX FROM THERMUS THERMOPHILUS

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

Entity 3 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)