1b08
LUNG SURFACTANT PROTEIN D (SP-D) (FRAGMENT)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1b08 |
| deposition_date | 1998-11-18 |
| title | LUNG SURFACTANT PROTEIN D (SP-D) (FRAGMENT) |
| keywords | C-TYPE LECTIN, CRD, SP-D, COLECTIN, ALPHA-HELICAL COILED-COIL, LUNG SURFACTANT, SUGAR BINDING PROTEIN; SUGAR BINDING PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 26.68 Å |
| rg_electron | 25.38 Å |
| i0 | 42570400.00 |
| molecular_weight | 49369.0 kDa |
| excluded_volume | 61255 ų |
| envelope_volume | 74435 ų |
| shell_volume | 25494 ų |
| envelope_diameter | 84.2 Å |
| shell_rg | 31.42 Å |
| envelope_rg | 25.64 Å |
| shape_rg | 25.33 Å |
| total_rg | 26.23 Å |
| total_atoms | 3459 |
| n_residues | 451 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 79.4 Å |
| rg_real | 26.55 Å |
| rg_real_error | 0.65 Å |
| i0_real | 4.2570e+07 |
| i0_real_error | 6.4440e+05 |
| rg_reciprocal | 26.59 Å |
| i0_reciprocal | 42570000.0000 |
| total_estimate | 0.9133 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 39.0 Å |
| skewness | 0.034 |
| kurtosis | -0.775 |
| angular_range | — – 0.2950 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 15350000.0000 |
| n_real_points | 60 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.961; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.994; Smooth: 0.996 |