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1b0l

RECOMBINANT HUMAN DIFERRIC LACTOFERRIN

Method: X-RAY DIFFRACTION D_max: 96.6 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1b0l
deposition_date	1998-11-11
title	RECOMBINANT HUMAN DIFERRIC LACTOFERRIN
keywords	TRANSFERRIN, BINDING PROTEIN, METALLOPROTEIN, METAL BINDING PROTEIN; METAL BINDING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	30.32 Å
rg_electron	29.46 Å
i0	100318000.00
molecular_weight	76292.0 kDa
excluded_volume	94319 Å³
envelope_volume	117120 Å³
shell_volume	33446 Å³
envelope_diameter	97.7 Å
shell_rg	36.41 Å
envelope_rg	29.25 Å
shape_rg	29.45 Å
total_rg	30.12 Å
total_atoms	5347
n_residues	691
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	96.6 Å
rg_real	30.35 Å
rg_real_error	0.69 Å
i0_real	1.0030e+08
i0_real_error	1.5410e+06
rg_reciprocal	30.34 Å
i0_reciprocal	100300000.0000
total_estimate	0.8954
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	29.7 Å
skewness	0.304
kurtosis	-0.628
angular_range	— – 0.2600 Å⁻¹
current_alpha	0.0000
highest_alpha	24930000.0000
n_real_points	53
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.918; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.965; Smooth: 0.916

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4. Crystallography & Experiment

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5. Entities & Polymer Info (4)

Entity 1 polymer

description	PROTEIN (LACTOFERRIN)
formula_weight	76293.3 kDa
mutation	A10T
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	5641

GRRRSVQWCTVSQPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSEEEVAARRARVVWCAVGEQELRKCNQWSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDGGYVYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDEYFSQSCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRMDKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQSETKNLLFNDNTECLARLHGKTTYEKYLGPQYVAGITNLKKCSTSPLLEACEFLRK

Source

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Aspergillus awamori

Entity 2 non-polymer

description	FE (III) ION
formula_weight	55.8 kDa
src_method	syn
entity_count	2

Entity 3 non-polymer

description	CARBONATE ION
formula_weight	60.0 kDa
src_method	syn
entity_count	2

Entity 4 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	294

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6. Citations (2)

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length_a	156.250 Å
length_b	97.530 Å
length_c	55.870 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.200 Å
resolution_low	10.000 Å
r_factor	0.1810
r_work	—
r_free	0.2740

fit	/app/data/saxs_computation/b0/1b0l/1b0l.fit
pddf	/app/data/pr_computation/b0/1b0l/1b0l.pr.out
profile	/app/data/saxs_computation/b0/1b0l/1b0l.dat

RECOMBINANT HUMAN DIFERRIC LACTOFERRIN

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction