EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX

entry_id	1b3t
deposition_date	1998-12-14
title	EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
keywords	NUCLEAR PROTEIN, PROTEIN-DNA COMPLEX, DNA-BINDING, ACTIVATOR, ORIGIN-BINDING PROTEIN; PROTEIN/DNA
method	X-RAY DIFFRACTION

rg_guinier	21.85 Å
rg_electron	20.59 Å
i0	41186900.00
molecular_weight	43019.0 kDa
excluded_volume	50921 ų
envelope_volume	60139 ų
shell_volume	23952 ų
envelope_diameter	69.4 Å
shell_rg	27.67 Å
envelope_rg	20.86 Å
shape_rg	20.54 Å
total_rg	21.45 Å
total_atoms	2982
n_residues	330
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	67.8 Å
rg_real	21.71 Å
rg_real_error	0.32 Å
i0_real	4.1190e+07
i0_real_error	5.4710e+05
rg_reciprocal	21.74 Å
i0_reciprocal	41190000.0000
total_estimate	0.9064
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	27.3 Å
skewness	0.141
kurtosis	-0.496
angular_range	— – 0.3650 Å−1
current_alpha	0.0000
highest_alpha	5957000.0000
n_real_points	68
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.934; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.981

Unit Cell

length_a	60.083 Å
length_b	64.501 Å
length_c	111.938 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	2.200 Å
resolution_low	6.000 Å
r_factor	0.2080
r_work	0.2080
r_free	0.2680

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/b3/1b3t/pr_distribution.json
• pr_output /app/data/pr_computation/b3/1b3t/1b3t.pr.out
• pr_plot /app/data/visualization/pr_computation/b3/1b3t/1b3t_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/b3/1b3t/1b3t.dat
• saxs_fit /app/data/saxs_computation/b3/1b3t/1b3t.fit
• saxs_log /app/data/saxs_computation/b3/1b3t/1b3t.log
• saxs_plot /app/data/visualization/saxs_computation/b3/1b3t/1b3t_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/b3/1b3t/1b3t.fit
pddf	/app/data/pr_computation/b3/1b3t/1b3t.pr.out
profile	/app/data/saxs_computation/b3/1b3t/1b3t.dat