1b5d
DCMP Hydroxymethylase from T4 (Intact)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1b5d |
| deposition_date | 1999-01-06 |
| title | DCMP Hydroxymethylase from T4 (Intact) |
| keywords | HYDROXYMETHYLASE, DNTP SYNTHESIZING COMPLEX, TRANSFERASE; TRANSFERASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 23.63 Å |
| rg_electron | 22.74 Å |
| i0 | 54186800.00 |
| molecular_weight | 57551.0 kDa |
| excluded_volume | 71947 ų |
| envelope_volume | 83465 ų |
| shell_volume | 29669 ų |
| envelope_diameter | 81.1 Å |
| shell_rg | 30.92 Å |
| envelope_rg | 23.11 Å |
| shape_rg | 22.76 Å |
| total_rg | 23.59 Å |
| total_atoms | 4058 |
| n_residues | 492 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 79.2 Å |
| rg_real | 23.51 Å |
| rg_real_error | 0.47 Å |
| i0_real | 5.4190e+07 |
| i0_real_error | 6.8550e+05 |
| rg_reciprocal | 23.54 Å |
| i0_reciprocal | 54190000.0000 |
| total_estimate | 0.7091 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 29.7 Å |
| skewness | 0.235 |
| kurtosis | -0.300 |
| angular_range | — – 0.3350 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 18550000.0000 |
| n_real_points | 65 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.790; Stabil: 1.000; Sysdev: 0.286; Positv: 1.000; Valcen: 1.000; Smooth: 0.989 |