1bdx
E. COLI DNA HELICASE RUVA WITH BOUND DNA HOLLIDAY JUNCTION, ALPHA CARBONS AND PHOSPHATE ATOMS ONLY
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1bdx |
| deposition_date | 1998-05-11 |
| title | E. COLI DNA HELICASE RUVA WITH BOUND DNA HOLLIDAY JUNCTION, ALPHA CARBONS AND PHOSPHATE ATOMS ONLY |
| keywords | DNA-BINDING, BRANCH MIGRATION, HOLLIDAY JUNCTION, RUV, COMPLEX DNA-BINDING PROTEIN-DNA, TRANSFERASE-DNA COMPLEX; TRANSFERASE/DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 30.56 Å |
| rg_electron | 29.40 Å |
| i0 | 121196000.00 |
| molecular_weight | 85549.0 kDa |
| excluded_volume | 104190 ų |
| envelope_volume | 104850 ų |
| shell_volume | 31820 ų |
| envelope_diameter | 89.5 Å |
| shell_rg | 34.85 Å |
| envelope_rg | 27.24 Å |
| shape_rg | 29.61 Å |
| total_rg | 29.81 Å |
| total_atoms | 64 |
| n_residues | 64 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 92.0 Å |
| rg_real | 30.39 Å |
| rg_real_error | 0.35 Å |
| i0_real | 1.2120e+08 |
| i0_real_error | 1.5740e+06 |
| rg_reciprocal | 30.47 Å |
| i0_reciprocal | 121200000.0000 |
| total_estimate | 0.9137 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 1 |
| r_peak_primary | 37.1 Å |
| skewness | 0.118 |
| kurtosis | -0.605 |
| angular_range | — – 0.2600 Å−1 |
| current_alpha | 0.0001 |
| highest_alpha | 14970000.0000 |
| n_real_points | 53 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.970; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.991; Smooth: 0.974 |