1by9
;CRYSTAL STRUCTURE OF THE E2 DNA-BINDING DOMAIN FROM HUMAN PAPILLOMAVIRUS TYPE-16: IMPLICATIONS FOR ITS DNA BINDING-SITE SELECTION MECHANISM ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1by9 |
| deposition_date | 1998-10-27 |
| title | ;CRYSTAL STRUCTURE OF THE E2 DNA-BINDING DOMAIN FROM HUMAN PAPILLOMAVIRUS TYPE-16: IMPLICATIONS FOR ITS DNA BINDING-SITE SELECTION MECHANISM ; |
| keywords | PAPILLOMAVIRUS, TRANSCRIPTION REGULATION, BETA-BARREL; TRANSCRIPTION REGULATION |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.21 Å |
| rg_electron | 11.72 Å |
| i0 | 1434520.00 |
| molecular_weight | 8259.0 kDa |
| excluded_volume | 10477 ų |
| envelope_volume | 11694 ų |
| shell_volume | 8770 ų |
| envelope_diameter | 41.8 Å |
| shell_rg | 17.05 Å |
| envelope_rg | 12.14 Å |
| shape_rg | 11.71 Å |
| total_rg | 13.19 Å |
| total_atoms | 583 |
| n_residues | 72 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.6 Å |
| rg_real | 13.14 Å |
| rg_real_error | 0.30 Å |
| i0_real | 1.4350e+06 |
| i0_real_error | 1.5650e+04 |
| rg_reciprocal | 13.14 Å |
| i0_reciprocal | 1435000.0000 |
| total_estimate | 0.8848 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 17.3 Å |
| skewness | 0.145 |
| kurtosis | -0.295 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 201000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.849; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.957 |