1c8d
CANINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1c8d |
| deposition_date | 2000-05-05 |
| title | CANINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE |
| keywords | Capsid, canine parvovirus, strain D, empty capsid, A300D, Icosahedral virus, Virus; VIRUS |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 29.49 Å |
| rg_electron | 28.78 Å |
| i0 | 63581500.00 |
| molecular_weight | 61602.0 kDa |
| excluded_volume | 76680 ų |
| envelope_volume | 108610 ų |
| shell_volume | 32499 ų |
| envelope_diameter | 110.6 Å |
| shell_rg | 34.64 Å |
| envelope_rg | 29.28 Å |
| shape_rg | 28.74 Å |
| total_rg | 29.52 Å |
| total_atoms | 4353 |
| n_residues | 548 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 103.9 Å |
| rg_real | 29.59 Å |
| rg_real_error | 0.89 Å |
| i0_real | 6.3580e+07 |
| i0_real_error | 9.8960e+05 |
| rg_reciprocal | 29.55 Å |
| i0_reciprocal | 63580000.0000 |
| total_estimate | 0.8560 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 32.7 Å |
| skewness | 0.519 |
| kurtosis | 0.106 |
| angular_range | — – 0.2700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 7027000.0000 |
| n_real_points | 55 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.736; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.978; Smooth: 0.937 |