1cm3

HIS15ASP HPR FROM E. COLI

Method: X-RAY DIFFRACTION Dmax: 46.5 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

HISTIDINE-CONTAINING PROTEIN

Escherichia coli

UniProt P0AA04

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein monomer Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 1–85 Mutation:HIS15ASP No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:pH 5.4;pH 5.4 Resolution 1.60 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

22 other PDB entries and 28 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name PTHP_ECOLI
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–85; UniProt 1–85

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1cm3

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1cm3
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1cm3
Deposition date deposition_date1999-05-13
Structure title titleHIS15ASP HPR FROM E. COLI
Keywords keywordsPHOSPHOTRANSFERASE, TRANSFERASE; TRANSFERASE
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier13.23
Radius of gyration Rg (electron density) rg_electron11.66
Forward intensity I(0) i01808110.00
Molecular weight molecular_weight9081.0 kDa
Excluded volume excluded_volume11401 ų
Envelope volume envelope_volume12476 ų
Hydration-shell volume shell_volume9278 ų
Envelope diameter envelope_diameter39.7
Shell Rg shell_rg17.18
Envelope Rg envelope_rg11.92
Shape Rg shape_rg11.65
Total Rg total_rg13.08
Total atoms total_atoms782
Residues n_residues85
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax46.5
Rg (real space) rg_real13.14
Rg uncertainty (real space) rg_real_error0.30
I(0) (real space) i0_real1.8080e+06
I(0) uncertainty (real space) i0_real_error1.7830e+04
Rg (reciprocal space) rg_reciprocal13.14
I(0) (reciprocal space) i0_reciprocal1808000.0000
Solution quality estimate total_estimate0.7727
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary17.1
Skewness Skewness skewness0.115
Kurtosis Kurtosis kurtosis-0.339
Angular range angular_range— – 0.5000 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha353000.0000
Real-space data points n_real_points80
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.682; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.994; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (2)

7. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1cm3a_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.94 — HPr-like
Superfamily Superfamily superfamilyd.94.1 — HPr-like
Family Family familyd.94.1.1 — HPr-like

CATH v4.4 (1 domains)

Domain ID domain_id1cm3A00
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology1340 — Histidine-containing Protein; Chain: A;
Homologous superfamily homologous superfamily10 — HPr-like

8. Citations (1)

9. Files and Curves (10)