HUMAN CYTOMEGALOVIRUS PROTEASE

Method: X-RAY DIFFRACTION D_max: 80.5 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1cmv
deposition_date	1996-08-26
title	HUMAN CYTOMEGALOVIRUS PROTEASE
keywords	COAT PROTEIN, HYDROLASE, SERINE PROTEASE, PHOSPHORYLATION; SERINE PROTEASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	24.32 Å
rg_electron	23.40 Å
i0	34227100.00
molecular_weight	44577.0 kDa
excluded_volume	55677 Å³
envelope_volume	65916 Å³
shell_volume	24266 Å³
envelope_diameter	81.9 Å
shell_rg	29.71 Å
envelope_rg	23.41 Å
shape_rg	23.43 Å
total_rg	24.07 Å
total_atoms	3860
n_residues	403
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	80.5 Å
rg_real	24.41 Å
rg_real_error	0.51 Å
i0_real	3.4230e+07
i0_real_error	4.7350e+05
rg_reciprocal	24.39 Å
i0_reciprocal	34230000.0000
total_estimate	0.8700
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	25.6 Å
skewness	0.478
kurtosis	-0.222
angular_range	— – 0.3250 Å⁻¹
current_alpha	0.0000
highest_alpha	11930000.0000
n_real_points	64
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.813; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.943; Smooth: 0.926

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	76.800 Å
length_b	76.800 Å
length_c	172.600 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	16

space_group	P 41 21 2
int_tables_number	92
crystal_system	—

resolution	2.270 Å
resolution_low	8.000 Å
r_factor	0.2410
r_work	0.2410
r_free	0.3100

description	HUMAN CYTOMEGALOVIRUS PROTEASE
formula_weight	28071.5 kDa
ec_number	3.4.21.-
mutation	V141A, A144P
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	3914

HUMAN CYTOMEGALOVIRUS PROTEASE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Human herpesvirus 5
common_name	Human cytomegalovirus
ncbi_taxonomy_id	10359
host_organism	Escherichia coli

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	18

fit	/app/data/saxs_computation/cm/1cmv/1cmv.fit
pddf	/app/data/pr_computation/cm/1cmv/1cmv.pr.out
profile	/app/data/saxs_computation/cm/1cmv/1cmv.dat