1d3u
TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d3u |
| deposition_date | 1999-10-01 |
| title | TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI |
| keywords | PROTEIN-DNA COMPLEX, TRANSCRIPTION, HYPERTHERMOPHILE, GENE REGULATION-DNA COMPLEX; GENE REGULATION/DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 25.46 Å |
| rg_electron | 25.21 Å |
| i0 | 68667200.00 |
| molecular_weight | 57261.0 kDa |
| excluded_volume | 68584 ų |
| envelope_volume | 86344 ų |
| shell_volume | 28722 ų |
| envelope_diameter | 92.4 Å |
| shell_rg | 32.27 Å |
| envelope_rg | 25.32 Å |
| shape_rg | 25.19 Å |
| total_rg | 25.96 Å |
| total_atoms | 3967 |
| n_residues | 429 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 88.4 Å |
| rg_real | 25.39 Å |
| rg_real_error | 0.72 Å |
| i0_real | 6.8670e+07 |
| i0_real_error | 1.0540e+06 |
| rg_reciprocal | 25.41 Å |
| i0_reciprocal | 68670000.0000 |
| total_estimate | 0.8741 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 31.4 Å |
| skewness | 0.261 |
| kurtosis | -0.349 |
| angular_range | — – 0.3100 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 13680000.0000 |
| n_real_points | 63 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.790; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.992; Smooth: 0.997 |