1dbd
E2 DNA-BINDING DOMAIN FROM PAPILLOMAVIRUS BPV-1
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dbd |
| deposition_date | 1999-05-21 |
| title | E2 DNA-BINDING DOMAIN FROM PAPILLOMAVIRUS BPV-1 |
| keywords | DNA-BINDING DOMAIN, GENE REGULATION; GENE REGULATION |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 19.09 Å |
| rg_electron | 17.82 Å |
| i0 | 10087300.00 |
| molecular_weight | 22480.0 kDa |
| excluded_volume | 27807 ų |
| envelope_volume | 35639 ų |
| shell_volume | 17052 ų |
| envelope_diameter | 65.9 Å |
| shell_rg | 23.63 Å |
| envelope_rg | 18.17 Å |
| shape_rg | 17.78 Å |
| total_rg | 18.90 Å |
| total_atoms | 1584 |
| n_residues | 200 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 65.5 Å |
| rg_real | 19.01 Å |
| rg_real_error | 0.39 Å |
| i0_real | 1.0090e+07 |
| i0_real_error | 1.2090e+05 |
| rg_reciprocal | 19.03 Å |
| i0_reciprocal | 10090000.0000 |
| total_estimate | 0.8657 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 23.6 Å |
| skewness | 0.242 |
| kurtosis | -0.277 |
| angular_range | — – 0.4150 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1563000.0000 |
| n_real_points | 73 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.752; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.997 |