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1dgc

THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITY

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

PROTEIN (GCN4)

OrganismNot specified

UniProt P03069

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Homooligomer Protein 2 DNA 2 ;DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3') ; × 2 Consistent with all polymers

Other States of the Same Protein in the Database

Monomer
1zta 2ovn

2 assemblies

Homodimer
1ce9 1ce9 1fmh 1kql 1nkn 1nkn 1tmz 1zii 1zik 1zil 2ahp 2zta

35 assemblies; showing the first 12

Homotetramer
1ce9 1gcl 1kql 1unt 1unu 1unv 1unw 1unx 1uny 1unz 1uo0 1uo1

37 assemblies; showing the first 12

Other homooligomers
1gcm 1ij0 1ij1 1ij2 1ij3 1piq 1rb4 1rb5 1rb6 1swi 1zij 1zim

38 assemblies; showing the first 12

Heteromeric or nucleic-acid complex
1dgc 1fav 1gk6 1gzl 1gzl 1ihq 1ld4 1ld4 1ld4 1ld4 1ld4 1llm

89 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name GCN4_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain A； PDBConstruct 1–62； UniProt 220–281

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1dgc
Deposition date deposition_date1993-07-15
Structure title titleTHE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITY
Keywords keywordsPROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX; TRANSCRIPTION/DNA
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1dgc__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1dgc__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1dgc__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）24.23 Å
Rg (electron density)25.11 Å
Total Rg25.38 Å
Atom count1684
Residues148
Excluded volume27497 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1dgc__assembly_1__model_1 tetrameric （4） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1dgca_
Class classh — Coiled coil proteins
Fold Fold foldh.1 — Parallel coiled-coil
Superfamily Superfamily superfamilyh.1.3 — Leucine zipper domain
Family Family familyh.1.3.1 — Leucine zipper domain

CATH v4.4 (1 domains)

Domain ID domain_id1dgcA00
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology160 — Double Stranded RNA Binding Domain
Homologous superfamily homologous superfamily60 — Classic Zinc Finger
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7. Citations (1)