CRYSTAL STRUCTURE OF RAT LIVER DIHYDROPTERIDINE REDUCTASE

Method: X-RAY DIFFRACTION D_max: 59.0 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1dhr
deposition_date	1992-03-30
title	CRYSTAL STRUCTURE OF RAT LIVER DIHYDROPTERIDINE REDUCTASE
keywords	OXIDOREDUCTASE(ACTING ON NADH OR NADPH); OXIDOREDUCTASE(ACTING ON NADH OR NADPH)
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	18.24 Å
rg_electron	17.10 Å
i0	12593900.00
molecular_weight	25799.0 kDa
excluded_volume	32060 Å³
envelope_volume	36726 Å³
shell_volume	17764 Å³
envelope_diameter	61.5 Å
shell_rg	23.58 Å
envelope_rg	17.52 Å
shape_rg	17.10 Å
total_rg	18.10 Å
total_atoms	1808
n_residues	236
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	59.0 Å
rg_real	18.13 Å
rg_real_error	0.36 Å
i0_real	1.2590e+07
i0_real_error	1.5340e+05
rg_reciprocal	18.15 Å
i0_reciprocal	12590000.0000
total_estimate	0.7960
solution_quality	GOOD a GOOD solution
n_peaks	3
r_peak_primary	23.9 Å
skewness	0.148
kurtosis	-0.302
angular_range	— – 0.4350 Å⁻¹
current_alpha	0.0000
highest_alpha	2555000.0000
n_real_points	75
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.786; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.991; Smooth: 0.000

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

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6. Citations (1)

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length_a	50.100 Å
length_b	139.130 Å
length_c	64.930 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	C 2 2 21
int_tables_number	20
crystal_system	—

resolution	2.300 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

description	DIHYDROPTERIDINE REDUCTASE
formula_weight	25579.2 kDa
ec_number	1.6.99.10
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	1944

CRYSTAL STRUCTURE OF RAT LIVER DIHYDROPTERIDINE REDUCTASE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

Entity 3 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Rattus norvegicus
common_name	Norway rat
ncbi_taxonomy_id	10116

description	NICOTINAMIDE-ADENINE-DINUCLEOTIDE
formula_weight	663.4 kDa
src_method	syn
entity_count	1

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	136

fit	/app/data/saxs_computation/dh/1dhr/1dhr.fit
pddf	/app/data/pr_computation/dh/1dhr/1dhr.pr.out
profile	/app/data/saxs_computation/dh/1dhr/1dhr.dat