1dk2
REFINED SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dk2 |
| deposition_date | 1999-12-06 |
| title | REFINED SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA |
| keywords | ;DNA-BINDING, DEOXYRIBOSE 5'-PHOSPHATE LYASE, NUCLEOTIDYLTRANSFERASE, TRANSFERASE ;; TRANSFERASE |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.37 Å |
| rg_electron | 14.25 Å |
| i0 | 715700000.00 |
| molecular_weight | 236830.0 kDa |
| excluded_volume | 302200 ų |
| envelope_volume | 45949 ų |
| shell_volume | 19599 ų |
| envelope_diameter | 71.3 Å |
| shell_rg | 26.39 Å |
| envelope_rg | 20.59 Å |
| shape_rg | 14.19 Å |
| total_rg | 14.78 Å |
| total_atoms | 34500 |
| n_residues | 2150 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 37.0 Å |
| rg_real | 13.64 Å |
| rg_real_error | 0.04 Å |
| i0_real | 6.8240e+08 |
| i0_real_error | 4.8460e+06 |
| rg_reciprocal | 14.42 Å |
| i0_reciprocal | 715700000.0000 |
| total_estimate | 0.6854 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 1 |
| r_peak_primary | 15.9 Å |
| skewness | 0.117 |
| kurtosis | -0.547 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 5.3860 |
| highest_alpha | 92930.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.003; Oscil: 1.000; Stabil: 0.970; Sysdev: 0.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.000 |