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1dwv

MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and 4-amino tetrahydrobiopterin

Method: X-RAY DIFFRACTION D_max: 121.4 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1dwv
deposition_date	1999-12-14
title	MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and 4-amino tetrahydrobiopterin
keywords	;OXIDOREDUCTASE TRANSFERASE COMPLEX, COMPLEX (OXIDOREDUCTASE-TRANSFERASE), NITRIC OXIDE MONOOXYGENASE, HEME, DIMER, INTERMEDIATE, PTERIN, 4-AMINO-TETRAHYDROBIOPTERIN, OXIDOREDUCTASE-TRANSFERASE complex ;; OXIDOREDUCTASE/TRANSFERASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	37.34 Å
rg_electron	36.90 Å
i0	155920000.00
molecular_weight	100080.0 kDa
excluded_volume	124640 Å³
envelope_volume	163940 Å³
shell_volume	37774 Å³
envelope_diameter	126.5 Å
shell_rg	41.91 Å
envelope_rg	36.53 Å
shape_rg	36.84 Å
total_rg	37.40 Å
total_atoms	7036
n_residues	840
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	121.4 Å
rg_real	37.55 Å
rg_real_error	1.11 Å
i0_real	1.5590e+08
i0_real_error	2.7430e+06
rg_reciprocal	37.42 Å
i0_reciprocal	155900000.0000
total_estimate	0.8535
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	31.8 Å
skewness	0.339
kurtosis	-0.742
angular_range	— – 0.2100 Å⁻¹
current_alpha	0.0000
highest_alpha	24960000.0000
n_real_points	43
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.824; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.867; Smooth: 0.752

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4. Crystallography & Experiment

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5. Entities & Polymer Info (7)

Entity 1 polymer

description	NITRIC OXIDE SYNTHASE
formula_weight	48626.3 kDa
ec_number	1.14.13.39
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,B
atom_count	7461

QYVRIKNWGSGEILHDTLHHKATSDFTCKSKSCLGSIMNPKSLTRGPRDKPTPLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQVFDARNCSTAQEMFQHICRHILYATNNGNIRSAITVFPQRSDGKHDFRLWNSQLIRYAGYQMPDGTIRGDAATLEFTQLCIDLGWKPRYGRFDVLPLVLQADGQDPEVFEIPPDLVLEVTMEHPKYEWFQELGLKWYALPAVANMLLEVGGLEFPACPFNGWYMGTEIGVRDFCDTQRYNILEEVGRRMGLETHTLASLWKDRAVTEINVAVLHSFQKQNVTIMDHHTASESFMKHMQNEYRARGGCPADWIWLVPPVSGSITPVFHQEMLNYVLSPFYYYQIEPWKTHIWQ

Source

organism	MUS MUSCULUS
common_name	MOUSE
ncbi_taxonomy_id	10090
host_organism	ESCHERICHIA COLI

Entity 2 non-polymer

description	PROTOPORPHYRIN IX CONTAINING FE
formula_weight	616.5 kDa
src_method	syn
entity_count	2

Entity 3 non-polymer

description	2,4-DIAMINO-6-[2,3-DIHYDROXY-PROP-3-YL]-5,6,7,8-TETRAHYDROPTERIDINE
formula_weight	240.3 kDa
src_method	syn
entity_count	2

Entity 4 non-polymer

description	ZINC ION
formula_weight	65.4 kDa
src_method	syn
entity_count	2

Entity 5 non-polymer

description	SULFATE ION
formula_weight	96.1 kDa
src_method	syn
entity_count	8

Entity 6 non-polymer

description	N-OMEGA-HYDROXY-L-ARGININE
formula_weight	190.2 kDa
src_method	syn
entity_count	2

Entity 7 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	425

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6. Citations (5)

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length_a	212.980 Å
length_b	212.980 Å
length_c	114.200 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	24

space_group	P 61 2 2
int_tables_number	178
crystal_system	—

resolution	2.350 Å
resolution_low	30.000 Å
r_factor	0.2470
r_work	0.2470
r_free	0.2860

fit	/app/data/saxs_computation/dw/1dwv/1dwv.fit
pddf	/app/data/pr_computation/dw/1dwv/1dwv.pr.out
profile	/app/data/saxs_computation/dw/1dwv/1dwv.dat