1dyw
Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dyw |
| deposition_date | 2000-02-10 |
| title | Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans |
| keywords | ISOMERASE(PEPTIDYL-PROLYL CIS-TRANS), ISOMERASE, ROTAMASE; ISOMERASE(PEPTIDYL-PROLYL CIS-TRANS) |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.61 Å |
| rg_electron | 14.46 Å |
| i0 | 6628740.00 |
| molecular_weight | 18466.0 kDa |
| excluded_volume | 23007 ų |
| envelope_volume | 24769 ų |
| shell_volume | 14188 ų |
| envelope_diameter | 46.4 Å |
| shell_rg | 20.66 Å |
| envelope_rg | 14.69 Å |
| shape_rg | 14.43 Å |
| total_rg | 15.67 Å |
| total_atoms | 1296 |
| n_residues | 172 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 47.8 Å |
| rg_real | 15.47 Å |
| rg_real_error | 0.22 Å |
| i0_real | 6.6290e+06 |
| i0_real_error | 6.2880e+04 |
| rg_reciprocal | 15.48 Å |
| i0_reciprocal | 6629000.0000 |
| total_estimate | 0.8945 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 21.2 Å |
| skewness | 0.011 |
| kurtosis | -0.471 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1655000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.885; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.980; Smooth: 0.990 |