1e7z
Crystal structure of the EMAP2/RNA binding domain of the p43 protein from human aminoacyl-tRNA synthetase complex
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1e7z |
| deposition_date | 2000-09-13 |
| title | Crystal structure of the EMAP2/RNA binding domain of the p43 protein from human aminoacyl-tRNA synthetase complex |
| keywords | RNA BINDING DOMAIN, OB-FOLD, TRNA SYNTHETASE COMPLEX; RNA BINDING DOMAIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.58 Å |
| rg_electron | 15.32 Å |
| i0 | 7844470.00 |
| molecular_weight | 19513.0 kDa |
| excluded_volume | 23960 ų |
| envelope_volume | 27621 ų |
| shell_volume | 15010 ų |
| envelope_diameter | 52.2 Å |
| shell_rg | 21.41 Å |
| envelope_rg | 15.55 Å |
| shape_rg | 15.30 Å |
| total_rg | 16.42 Å |
| total_atoms | 1339 |
| n_residues | 173 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 52.2 Å |
| rg_real | 16.43 Å |
| rg_real_error | 0.27 Å |
| i0_real | 7.8440e+06 |
| i0_real_error | 9.4800e+04 |
| rg_reciprocal | 16.44 Å |
| i0_reciprocal | 7845000.0000 |
| total_estimate | 0.8849 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 23.1 Å |
| skewness | 0.023 |
| kurtosis | -0.420 |
| angular_range | — – 0.4800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1187000.0000 |
| n_real_points | 78 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.842; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.982; Smooth: 0.992 |