1ecy

PROTEASE INHIBITOR ECOTIN

Method: X-RAY DIFFRACTION Dmax: 77.3 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

ECOTIN

Escherichia coli

UniProt P23827

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Other combination Homooligomer Protein × 2 其他Polymer 26 PDB declaration: dimeric(2) Consistent with protein copy count Chain A; UniProt 21–162 Not recorded alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose × 16 alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose × 10 GLC alpha-D-glucopyranose × 8 BGC beta-D-glucopyranose × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed experimental conditions Resolution 2.19 Å R-free 0.319

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

21 other PDB entries and 26 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ECOT_ECOLI
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–142; UniProt 21–162

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1ecy

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1ecy
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1ecy
Deposition date deposition_date1996-08-06
Structure title titlePROTEASE INHIBITOR ECOTIN
Keywords keywordsBETA-SHEET STRUCTURE, SERINE PROTEASE INHIBITOR, PERIPLASMIC, PROTEASE INHIBITOR; PROTEASE INHIBITOR
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier22.31
Radius of gyration Rg (electron density) rg_electron21.14
Forward intensity I(0) i08957970.00
Molecular weight molecular_weight21445.0 kDa
Excluded volume excluded_volume26793 ų
Envelope volume envelope_volume39585 ų
Hydration-shell volume shell_volume16700 ų
Envelope diameter envelope_diameter78.9
Shell Rg shell_rg26.37
Envelope Rg envelope_rg22.03
Shape Rg shape_rg21.02
Total Rg total_rg22.40
Total atoms total_atoms1489
Residues n_residues142
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax77.3
Rg (real space) rg_real22.36
Rg uncertainty (real space) rg_real_error0.60
I(0) (real space) i0_real8.9580e+06
I(0) uncertainty (real space) i0_real_error1.2100e+05
Rg (reciprocal space) rg_reciprocal22.35
I(0) (reciprocal space) i0_reciprocal8958000.0000
Solution quality estimate total_estimate0.8666
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary22.2
Skewness Skewness skewness0.376
Kurtosis Kurtosis kurtosis-0.387
Angular range angular_range— – 0.3550 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha1880000.0000
Real-space data points n_real_points67
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.799; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.922; Smooth: 0.943

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (6)

7. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1ecya_
Class classb — All beta proteins
Fold Fold foldb.16 — Ecotin, trypsin inhibitor
Superfamily Superfamily superfamilyb.16.1 — Ecotin, trypsin inhibitor
Family Family familyb.16.1.1 — Ecotin, trypsin inhibitor

CATH v4.4 (1 domains)

Domain ID domain_id1ecyA00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily550 — Ecotin

8. Citations (2)

9. Files and Curves (10)