1slx

RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; ZINC-BOUND

Method: X-RAY DIFFRACTION Dmax: 80.4 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

ECOTIN

Escherichia coli

UniProt P23827

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 4 PDB declaration: tetrameric(4) Consistent with protein copy count Chain A; UniProt 21–162 Mutation:CHAIN A, A86H ANIONIC TRYPSIN × 2 (P00763) CA CALCIUM ION × 2 ACT ACETATE ION × 2 ZN ZINC ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed experimental conditions Resolution 2.20 Å R-free 0.267

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

21 other PDB entries and 26 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ECOT_ECOLI
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–142; UniProt 21–162

ANIONIC TRYPSIN

Rattus norvegicus

UniProt P00763

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 4 PDB declaration: tetrameric(4) Consistent with protein copy count Chain B; UniProt 24–246 Mutation:CHAIN B, N143H, E151H ECOTIN × 2 (P23827) CA CALCIUM ION × 2 ACT ACETATE ION × 2 ZN ZINC ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed experimental conditions Resolution 2.20 Å R-free 0.267

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

35 other PDB entries and 35 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name TRY2_RAT
Isoform
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–223; UniProt 24–246

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1slx

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1slx
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1slx
Deposition date deposition_date1996-02-07
Structure title titleRAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; ZINC-BOUND
Keywords keywords;SERINE PROTEASE, INHIBITOR, COMPLEX, METAL BINDING SITES, PROTEIN ENGINEERING, PROTEASE-SUBSTRATE INTERACTIONS, METALLOPROTEINS, COMPLEX (SERINE PROTEASE-INHIBITOR) COMPLEX ;; COMPLEX (SERINE PROTEASE/INHIBITOR)
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier24.00
Radius of gyration Rg (electron density) rg_electron23.48
Forward intensity I(0) i026172000.00
Molecular weight molecular_weight38290.0 kDa
Excluded volume excluded_volume47586 ų
Envelope volume envelope_volume61449 ų
Hydration-shell volume shell_volume22580 ų
Envelope diameter envelope_diameter83.1
Shell Rg shell_rg29.77
Envelope Rg envelope_rg23.97
Shape Rg shape_rg23.52
Total Rg total_rg24.15
Total atoms total_atoms2680
Residues n_residues347
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax80.4
Rg (real space) rg_real24.10
Rg uncertainty (real space) rg_real_error0.60
I(0) (real space) i0_real2.6170e+07
I(0) uncertainty (real space) i0_real_error3.7360e+05
Rg (reciprocal space) rg_reciprocal24.08
I(0) (reciprocal space) i0_reciprocal26170000.0000
Solution quality estimate total_estimate0.8665
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary23.9
Skewness Skewness skewness0.442
Kurtosis Kurtosis kurtosis-0.395
Angular range angular_range— – 0.3300 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha6750000.0000
Real-space data points n_real_points65
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.815; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.892; Smooth: 0.923

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (6)

7. Fold Classification (SCOP + CATH) 5 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1slxa_
Class classb — All beta proteins
Fold Fold foldb.16 — Ecotin, trypsin inhibitor
Superfamily Superfamily superfamilyb.16.1 — Ecotin, trypsin inhibitor
Family Family familyb.16.1.1 — Ecotin, trypsin inhibitor
Domain ID domain_idd1slxb_
Class classb — All beta proteins
Fold Fold foldb.47 — Trypsin-like serine proteases
Superfamily Superfamily superfamilyb.47.1 — Trypsin-like serine proteases
Family Family familyb.47.1.2 — Eukaryotic proteases

CATH v4.4 (3 domains)

Domain ID domain_id1slxA00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily550 — Ecotin
Domain ID domain_id1slxB01
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily10 — Trypsin-like serine proteases
Domain ID domain_id1slxB02
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily10 — Trypsin-like serine proteases

8. Citations (2)

9. Files and Curves (10)